Geobacter sp. M18: GM18_0443
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Entry
GM18_0443 CDS
T01421
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
geb
Geobacter sp. M18
Pathway
geb03030
DNA replication
geb03410
Base excision repair
geb03420
Nucleotide excision repair
geb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
geb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GM18_0443
03410 Base excision repair
GM18_0443
03420 Nucleotide excision repair
GM18_0443
03440 Homologous recombination
GM18_0443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
geb03032
]
GM18_0443
03400 DNA repair and recombination proteins [BR:
geb03400
]
GM18_0443
Enzymes [BR:
geb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GM18_0443
DNA replication proteins [BR:
geb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GM18_0443
DNA repair and recombination proteins [BR:
geb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GM18_0443
NER (nucleotide excision repair)
GGR (global genome repair) factors
GM18_0443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ADW11926
UniProt:
E8WPE7
LinkDB
All DBs
Position
549181..551859
Genome browser
AA seq
892 aa
AA seq
DB search
MATERETLYLLDGSSYIYRAYFAIRHLSSPNGFPTNALYGFTQMLLKVMKDRAPAHVAVV
FDAGKITFRNELFPAYKATRSAMPEDLAQQIEPIKQMVRAFSIPALELPGWEADDIIGTI
ARKAEAAGMDCVVVTGDKDLMQIVSEHVTLLDTMKDKSFGIPDVHEKFGVGPGRVVDVLA
LWGDTSDNIPGVPGIGEVTAKKLMQEFGTLDELLARACEVKGKTGERLIEFADQARLCRT
LATIDCDAPIEYNIDDFAVTPPDNRRLAALFREYGFATLLKDLTSSPTLSCDHYALVLTE
AELRELVEKLKKAPAFAIDLETTSLNPLDASIVGYAVSCLAHEAYYIPIGHRYLGAPEQL
PEALVLELLGPLLTDPDRKKIGQNLKYDYQVLQQSGVELAGIWCDTMLAAYLVNPSRNSQ
GLDALALEYLDHRMISYAEVAGTGKCELNFSEVDLDRAGPYSCEDADATYLLHEILLPKV
REQGMEGLLFDVEMPLMKILADMELCGVKLDVELMKELSTGFGRQLIELEAKIHEHCGGS
FNINSPKQLGEMLFERMGLAVGKKTKGKTGWSTNVEELERLAEEHEVARLLLQYRSISKL
KSTYTDALPRLVDPKTGRVHTSYNQAITNTGRLSSSDPNLQNIPVRGEEGRGIRRAFIAE
PGSLILSADYSQIELRVLAHLSGDRVLCEAFAAGEDIHRRTAAEVFGMFPELVTAEMRRQ
AKVINFGVIYGQGAFSLAKELGVAPKQAKAFIENYFERHSGARSFLDRCIAEAETCGFVT
TILGRRLQIPEIASKNGNARAFAQRNATNYPIQGSAADIIKAAMIRVTRRMLEEKVASRL
IMQVHDELVFEVPRNERELMEDLVRAEMEGALPLSVPLKVDLNFGLNWAEAH
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaccgaaagagaaactctgtacctgctggacggttcttcctacatataccgggcc
tacttcgccatccgccatctaagctcccccaacggcttccccaccaacgcgctgtacggc
ttcacccagatgctcctgaaggtcatgaaggaccgcgcgccggcccacgtcgccgtggtc
ttcgatgccggcaagatcaccttccgaaacgagctcttccccgcctacaaggcgaccaga
agcgccatgcccgaggacctggcccagcagatcgagccgatcaagcagatggtccgcgcc
ttcagcataccggcgctggagctgccggggtgggaggcggacgacatcatagggaccatc
gccaggaaggccgaggcggccgggatggactgcgtggtggtcaccggcgacaaggacctg
atgcagatcgtgagcgagcacgtgacccttctggacaccatgaaggacaagagcttcggc
atccccgacgtgcacgagaagttcggggtggggcctggccgggtggtggacgtgctggcg
ctttggggcgacacctccgacaacatccccggcgtgcccggtatcggcgaggtgaccgcc
aaaaagctcatgcaggagttcggcacgctggacgagctcctggcgcgcgcctgcgaggtg
aaggggaagaccggcgagcgtctcatcgagttcgccgaccaggctcggctctgccgcacc
ctggccaccatcgactgcgacgcacccatcgagtacaacatcgacgacttcgccgtgacg
ccgccggacaaccggaggctcgccgcgctgttccgcgagtacggcttcgccacgctttta
aaggacctgaccagctcacccaccctttcctgcgaccactatgccctggtcctgaccgag
gcggagttgcgcgaactggtggaaaagctgaagaaggcgccggccttcgccatcgacctc
gagaccacgagcctcaaccccctggacgcctccatcgtcgggtacgcggtgagctgcctg
gcgcacgaggcgtactacatcccgatcgggcaccgctacctcggcgcgccggaacagctc
ccggaggcgctggtgctggagcttctgggaccgcttctcaccgaccccgaccggaagaag
atcggccagaacctgaagtacgactaccaggtgctgcagcaatccggggtggaactcgcc
ggcatctggtgcgacaccatgctggccgcctacctggtcaacccttcgcgcaacagccag
gggctggacgccctggcgctggagtacctggaccaccgcatgatctcctacgccgaggtc
gcaggtaccggcaagtgcgagctgaacttctccgaggtggacctggaccgcgccggcccc
tactcctgcgaggatgccgacgccacctaccttttgcacgagatcctgctccccaaggtg
cgcgagcaggggatggaagggctcctgttcgacgtcgagatgccgctcatgaagatcctg
gcggacatggagctgtgcggcgtgaagctcgacgtggagctcatgaaggagctttccacc
ggtttcggcaggcagctgatcgagctggaggcgaaaatccacgagcactgcggcggctcc
ttcaatatcaattcccccaagcagctgggggagatgctcttcgaacggatggggcttgcc
gtcggcaagaagaccaaggggaagaccggctggtccaccaacgtggaggagctggagcgg
ctggccgaggagcacgaggtggcgcggctgctgttgcagtaccgcagcatctccaagctg
aagtcgacctacaccgacgcccttcccaggctggtcgacccgaaaaccggccgcgtgcac
acctcctacaaccaggcgatcaccaacaccggcaggctctcctcctccgacccgaacctg
cagaacatcccggtccgcggagaggaggggcgcggcatccggcgcgccttcatcgccgag
ccggggagcctgatcctctccgccgactattcgcagatcgagctgagggtgctggcgcac
ctctccggcgaccgggtgctctgcgaggcgttcgccgccggtgaggacatccaccggcgc
accgcggccgaggtgttcggcatgttccccgagctggtcacggcggagatgcggcgccag
gccaaggtgatcaacttcggcgtcatctacggccagggcgccttttcgctggccaaggag
ctcggggttgcgcccaagcaggccaaggccttcatcgagaactacttcgagcgccattct
ggcgccaggagctttctggacagatgcatagccgaggccgagacctgcggtttcgtcacc
accatactggggaggaggctgcagatcccggagatcgccagcaaaaacggcaacgcgcgc
gccttcgcccagcgaaacgccaccaactatccgatacagggatcggccgcggatatcatc
aaggccgccatgatcagggtgacgcgccgcatgctcgaggagaaggtggcgagccgtctg
atcatgcaggtgcacgacgaactggtgttcgaggtgccgcgaaacgagcgggaactgatg
gaggatctggtgcgcgccgagatggagggggcactgccgctctccgtgccgctcaaggtg
gacctcaatttcggcctgaactgggcggaagcgcattaa
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