KEGG   Gemella sp. ND 6198: CG018_01825
Entry
CG018_01825       CDS       T05584                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
geq  Gemella sp. ND 6198
Pathway
geq03030  DNA replication
geq03410  Base excision repair
geq03420  Nucleotide excision repair
geq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:geq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CG018_01825
   03410 Base excision repair
    CG018_01825
   03420 Nucleotide excision repair
    CG018_01825
   03440 Homologous recombination
    CG018_01825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:geq03032]
    CG018_01825
   03400 DNA repair and recombination proteins [BR:geq03400]
    CG018_01825
Enzymes [BR:geq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CG018_01825
DNA replication proteins [BR:geq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CG018_01825
DNA repair and recombination proteins [BR:geq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     CG018_01825
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CG018_01825
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 HHH_5 HHH_2
Other DBs
NCBI-ProteinID: AXI26274
UniProt: A0AAD0PXX4
LinkDB
Position
complement(400063..402678)
AA seq 871 aa
MDKIILLDGNSLSYRAFYAMPALKNKKGLYTNSVYGFTLMLERVLTDVKPKYALVAFDKG
KQTFRHKSYENYKGTRDKTPDELVEQFGYVRELIESYGIKYEEHFDYEADDIIGSYARLA
EKAGLEVIIVSGDKDLTQLASENITIYYTKRGVTEIDYYTPEFIKEKYNLTPEQIIDMKG
LMGDKSDNIPGIAGVGEKTAIKLLTEYGSVENILDNIDNISGKKLKERLTEGKEDALISK
KLATIHTEVPLENKLEELIFEENRKKKIKLFEKLEFTSFLKKLRIEAEKEGLETEEELEI
IHATDKTRIDFNSASIHAECYTEDYHNSSVVGIAVYNQEKIYLFSEDSFFSNETVLDYLT
SENKKIVYDYKKLMYLALKNGTTINGDVFDVMIAAYLADVTSKIQIDKIVFNYLGEILKS
DEEIYGKGARRTLPVNSVIHSYLAQIVSYISKLEEPLREKLIEEDMMNLFENIEIKTAKV
LAKMEFEGIHVSKKELEIMSVELDKRISTLEAGIHALAGEEFNIASPKQLAVILFEKLNL
PPIKKIKTGYSTSVEVLEQLQNAHEIIPLIMEYRILAKLNSTYAKGLVKDITREGKIHTR
YEQTLTQTGRLSSVNPNLQNIPTRIEEGKKIRKAFISGSEDRVILSIDYSQIELRVLAHI
ANDDRMIDAFEHDIDIHAKTASDVNGVTLEEVTPAMRREAKAVNFGIIYGISDFGLSNNL
GITRKRAKEFIKKYLETFPGVKQYMEDIVNFAKEKGYVETLYHRRRNLPEINSKNKMIVN
LNSRIAMNTPIQGAAADIIKIAMINVNDYIEKNNIDAKLLLQVHDELILDVNKKVVEEFT
KEIVKIMESAAKLSVKLKAEAGVGDSWYNVK
NT seq 2616 nt   +upstreamnt  +downstreamnt
atggataaaataattttattggatggtaatagtttgagctatcgtgctttttatgctatg
ccggcactaaaaaataaaaaagggttatacacgaacagtgtttatggttttaccttaatg
ttggaaagagttttaaccgatgttaagccgaaatatgcacttgttgcctttgataaagga
aagcaaacttttcgacataaaagttacgaaaattataaaggtacacgtgataaaacgcct
gacgagttggtggaacagttcggttatgtaagagagcttatagaatcttatggaataaaa
tatgaagagcattttgattatgaagcagacgatattatcggaagttatgcacgtttggca
gaaaaagccggcttagaagttattattgtttcaggcgataaagatttaactcagcttgca
agtgagaatatcacaatttattatacaaaacgaggagtaacggaaattgattattatact
ccggaatttattaaggaaaaatacaatttaactccggaacaaataattgatatgaaaggt
ttaatgggagataaatctgataatattccgggaatagccggagtcggtgagaaaactgcg
attaaactgcttaccgagtatggaagtgttgaaaatattttagataatattgataatata
agcggtaaaaagttaaaagagcgtctaacagaggggaaagaagatgccttgataagtaaa
aaattggctactatccatacagaagtaccgttagaaaataaactggaagaattaattttt
gaagaaaacagaaaaaagaaaataaaattatttgaaaaattggagtttacctcattttta
aaaaaattacgtatagaagcggaaaaagagggcttagaaacagaggaagaattggagata
atccatgctactgataaaacaagaatagattttaattcagcaagtatccatgcggaatgt
tatacggaagattatcataattccagtgtggtaggaatagctgtttataatcaagaaaaa
atttatttatttagtgaagattctttttttagtaacgaaacggttttggactatttaact
tccgaaaataaaaagatagtatatgattacaaaaaattgatgtatttagcgttaaaaaac
ggtactacaataaacggagatgtttttgatgttatgattgccgcatatttagcagatgta
acttcaaaaattcaaattgataaaatagtttttaattatcttggagaaattttaaaaagt
gatgaagaaatctacggcaaaggagcaagaagaaccttaccggttaatagtgtgattcat
tcctatttagctcagatagtaagttatatttcaaaattagaagagccgttaagggaaaaa
ttaattgaagaagatatgatgaatctttttgagaacatagaaataaaaaccgcaaaagtg
ttagcaaaaatggaatttgaaggtatccatgttagtaaaaaagagttagaaataatgagc
gtagaacttgataaacgaatttcaacgcttgaggccggtattcatgctttagcaggtgaa
gaatttaatatcgcatctccaaaacaactggcggtaattttatttgaaaaattaaattta
cctcctataaaaaaaataaaaacaggatattccacttctgtagaagtattggaacaactc
caaaacgctcatgaaattatcccgcttataatggagtacagaatattggcaaaacttaat
tcgacttatgctaaaggattagttaaagatattactcgtgaagggaaaattcatacacgt
tatgaacaaacattaactcaaacaggaagactatcatcggttaatccaaatcttcaaaat
ataccgacaagaatagaggaaggaaagaaaattagaaaagcatttatttcaggctctgaa
gatagagttattttgtcaattgactattcccaaattgaattaagggtattagctcatatt
gcgaatgatgacagaatgattgatgctttcgaacatgatattgatattcatgcaaaaacg
gcaagtgatgtgaatggagttacacttgaagaagtaacccctgctatgcgtcgtgaagct
aaggcggtaaattttgggataatatatggtatttccgattttggattatcaaataatctg
ggaataacaagaaaacgtgcaaaggaatttattaaaaagtatttagaaacatttccgggg
gtaaaacagtatatggaagatattgtaaactttgcgaaagaaaaggggtatgttgaaacg
ctgtaccatagaagaagaaaccttccggaaattaattcgaaaaataaaatgatagtaaat
ctaaattcacgtatcgcaatgaatacaccaattcaaggcgctgcagctgatataataaaa
atcgcaatgataaatgttaacgattatatagaaaaaaacaatattgatgctaaattgttg
cttcaagttcatgatgaattaattttggatgtaaataaaaaagtggtagaggaatttaca
aaagaaatagtgaaaataatggagagcgccgctaaactatctgtaaaactaaaagcggag
gcaggtgttggagatagttggtataatgttaagtaa

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