Geomonas oryzisoli: KP004_04350
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Entry
KP004_04350 CDS
T07282
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
ger
Geomonas oryzisoli
Pathway
ger00020
Citrate cycle (TCA cycle)
ger00640
Propanoate metabolism
ger00660
C5-Branched dibasic acid metabolism
ger01100
Metabolic pathways
ger01110
Biosynthesis of secondary metabolites
ger01120
Microbial metabolism in diverse environments
ger01200
Carbon metabolism
Module
ger_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ger_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
KP004_04350 (sucD)
00640 Propanoate metabolism
KP004_04350 (sucD)
00660 C5-Branched dibasic acid metabolism
KP004_04350 (sucD)
Enzymes [BR:
ger01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
KP004_04350 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QWV94423
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All DBs
Position
983776..984648
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AA seq
290 aa
AA seq
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MSILIGKETKVITQGITGATGLFHAQGAREYGTQMVGGVTPGKGGTVIDGFPVYDTVAEA
VYQTGATASVIYVPPPFAADSIMEAVDAGVELVCCITEGIPVLDMVKVKQYLVGKKTRLV
GPNCPGVITPGECKIGIMPGYIHKPGKIGVVSRSGTLTYEAVWQLTCIGLGQSTCVGIGG
DPVNGTSHIDCLRLFEEDPDTEAVIMIGEIGGSAEEEAARFVKENMTKPVAAYIAGVTAP
PGKRMGHAGAIISGGKGTATEKVAVLKECGISVAATPAEMAQALLKVYKP
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagcatattgatcggcaaggagaccaaggtcatcacgcaggggatcaccggcgcgacc
ggcctgttccacgcgcagggcgcccgcgagtacggcacgcagatggtgggaggggtgacc
cccggcaagggggggaccgtgatcgacggcttcccggtgtacgacacggtcgccgaggcc
gtgtaccagacaggcgccaccgcgagcgtcatctacgtcccgccgccgtttgccgcggac
tcgatcatggaggcggtggatgcgggcgtggagctagtctgctgcatcaccgaggggatc
ccggtcctcgacatggtgaaggtgaagcagtacctggtgggcaagaaaacccggctggtc
ggtcccaactgccccggcgtgatcacccccggcgagtgcaagatcggcatcatgcccggc
tacatccacaagccgggcaagatcggcgtcgtttcccgctccggcacgctcacctacgag
gcggtctggcagctgacctgcatcggcctcgggcagtccacctgcgtcgggatcggcggc
gacccggtgaacggcaccagccacatcgactgcctcaggctcttcgaggaggacccggat
accgaggcggtgatcatgatcggcgagatcggcggcagcgccgaggaggaggccgcccgc
ttcgtcaaggagaacatgaccaagccggtggcggcctacatcgccggggtcaccgctccc
ccggggaagaggatgggacatgccggcgccatcatctccggcggcaagggaaccgcgacc
gagaaggtggcggtcctcaaggagtgcggcatcagcgtcgcggccacccccgccgagatg
gcgcaggcgctgctcaaggtctacaaaccgtaa
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