Geomonas oryzisoli: KP004_04915
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Entry
KP004_04915 CDS
T07282
Name
(GenBank) nickel-dependent hydrogenase large subunit
KO
K06281
hydrogenase large subunit [EC:
1.12.99.6
]
Organism
ger
Geomonas oryzisoli
Pathway
ger00633
Nitrotoluene degradation
ger01120
Microbial metabolism in diverse environments
ger02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00633 Nitrotoluene degradation
KP004_04915
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KP004_04915
Enzymes [BR:
ger01000
]
1. Oxidoreductases
1.12 Acting on hydrogen as donor
1.12.99 With unknown physiological acceptors
1.12.99.6 hydrogenase (acceptor)
KP004_04915
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GFIT
Motif
Pfam:
NiFeSe_Hases
Motif
Other DBs
NCBI-ProteinID:
QWV94531
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Position
1109661..1111340
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AA seq
559 aa
AA seq
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MSRITLDPITRIEGHLRIDVEANGGKVTNAWSSAQMWRGIEVILKGRAPEDAWSFVQRFC
GVCTTVHAISSIRAVEHALDVEVPLNAQYIRNIMIAQHSVQDHIVHFYHLSALDWVDIVS
ALKADPKKTAQIAQSISDWPGNSEKEFKAVQDKLKAFVAGGKLGIFATGYWGHPAMKLSP
EVNLMAVAHYLKALDYQRKASQATAILGGKNPHIQNLVVGGVATAINTENIATLNMERLI
YLRTLMEETRDFVQKVYYPDLLAIAGAYKDWFKYGAGVTNYMAVPEFPEDTKNTKFMLPG
GVVMGGNIGGIRMVKDHRDDYLIKNIKENVTHAWYEGNGTLHPWDGETKPDYTDFKENGK
YSWCKAPTLDGKPVQVGPPAQIMAAYAAGNPKVKKLVDGAVSTLGISLKDIHSTMGRLYC
RGARAHVMADLSLENLDKLIANIASGDQTYANHTVIPKGEYRGVGFHEAPRGTLSHWIVI
KDKKIENYQAVVPSTWNAAPRNDKGELGPYEASLVGNPIADASKPLEVLRTVHSFDPCIA
CAVHTVDPEGAEITKVKVL
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtctagaatcacgcttgatcccatcacccgaatcgaaggacatctgaggatcgatgtc
gaagcaaacggcggcaaggtcaccaacgcctggtcctccgcccagatgtggcgcggcatc
gaggtcatcctcaaggggcgcgccccggaggacgcctggagcttcgtgcagcgtttctgc
ggcgtctgcaccaccgtgcacgccatctcgtccatccgcgccgtcgagcacgccctcgac
gtcgaggtgccgctgaacgcgcagtacatccgtaacatcatgatcgcgcagcactcggtg
caggaccacatcgtccacttctaccacctctcggctctcgactgggtcgacatcgtctcc
gcgctgaaggccgatcccaagaagaccgcgcagatcgcgcagagcatctccgactggccg
ggcaactctgagaaggagttcaaggcggtgcaggacaagctgaaggcgttcgtggccggc
ggcaagctcggcatcttcgcaaccggctactggggccacccggcgatgaaactctccccg
gaagtgaacctgatggcggtcgcccactacctgaaggcgctcgactaccagaggaaggca
tcccaggccaccgcgatcctcggcggcaagaacccgcacatccagaacctcgtggtcggc
ggcgtcgccaccgcgatcaacaccgagaacatcgcgaccctcaacatggagcgcctgatc
tacctcaggaccctcatggaagagacccgcgacttcgtccagaaggtctactacccggac
ctcctagccatcgccggcgcctacaaggactggttcaagtacggcgcgggcgtcaccaac
tacatggcggtgccggagttcccggaagacaccaagaacaccaagttcatgcttccgggc
ggcgtcgtcatgggcggcaacatcggcggcatcaggatggtcaaggatcaccgcgacgac
tacctgatcaagaacatcaaggagaacgtcacccacgcctggtacgagggtaacggcacc
ctgcatccctgggacggcgagaccaagccggactacaccgacttcaaagagaacggcaag
tactcctggtgcaaggctccgaccctcgacggcaagccggtccaggtcggtccgccggcc
cagatcatggccgcttacgccgctggcaacccgaaggtgaagaagctcgtggacggcgcc
gtatccaccctgggcatctcgctcaaggacatccactccaccatgggccgtctctactgc
cgcggcgcccgcgcccacgtcatggccgacctgtcgctggagaacctggacaagctgatc
gccaacatcgcgtccggcgaccagacctacgccaaccacaccgtgatcccgaaaggcgag
tacaggggcgtcggcttccacgaagcgccgcgcggcaccctgtcccactggatcgtgatc
aaggacaagaagatcgagaactaccaggccgtcgttccctccacctggaacgctgcgccg
aggaacgacaagggcgaactcggtccctacgaggcatcgctggtcggcaacccgatcgcg
gacgccagcaagccgctcgaggtgctgcgtaccgtccactccttcgacccgtgcatcgcc
tgcgccgttcacaccgtggatccggaaggcgctgagatcaccaaggtgaaggtgctgtag
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