Geomonas oryzisoli: KP004_16655
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Entry
KP004_16655 CDS
T07282
Name
(GenBank) B12-binding domain-containing radical SAM protein
KO
K04034
anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase [EC:
1.21.98.3
]
Organism
ger
Geomonas oryzisoli
Pathway
ger00860
Porphyrin metabolism
ger01100
Metabolic pathways
ger01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
KP004_16655
Enzymes [BR:
ger01000
]
1. Oxidoreductases
1.21 Catalysing the reaction X-H + Y-H = X-Y
1.21.98 With other, known, physiological acceptors
1.21.98.3 anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase
KP004_16655
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Motif
Pfam:
B12-binding
Radical_SAM
Glyco_transf_4
Glyco_trans_4_4
Motif
Other DBs
NCBI-ProteinID:
QWV92791
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Position
complement(3785522..3787045)
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AA seq
507 aa
AA seq
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MSIKRVALVTPPYHSGVVESAGTWLNVGFVYIAGSLRAAGYEVDYYDAMSLWHKWPEIEE
RLRAFAPDVVATTSFTASIAHALELTALAKKINPQVVTVHGNVHATFCYDEILKAEHDTV
DFVVRGEGEVTLVKLLDCLNAGGDPATVPGLSFWRDGAVVATPKAAPIADLDSLPMAWDL
VEWPIYRYRAKNNARLAIVSSSRGCMEKCSFCSQQLFWERSWRARSAENFVAELELLRDS
YGVEVAMLSDEIPTFDRERWVRILDLMIERKVGVKLLMETRVDDILRDADIMDKYREAGV
EHIYVGVEAGDQETLDLFNKNTKVEQSKAAIDIINNADIVSETSFVLGMPDDTPESIAKT
IELAKHYNPDMAFFLAIAPWPYAELYPELEPYVATTDFRKYNLVEPVIKPKNMTLEELER
ELGRASQKFFMHKFQNLHQLSPWKQEFMLAVFDILINNSYLAGQMRAMMKQGGQMPPEVQ
ALVKSVKGMQRAQDDAQSHPHTFAPIP
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgagcattaaaagagttgccctggtcacgccgccgtaccactccggtgtcgtcgagtcg
gccgggacctggctcaacgtcggcttcgtctacatcgccgggtcgctgcgtgccgcgggg
tacgaggtcgattactacgacgccatgagcctgtggcacaagtggccggagatcgaggag
cgcctgcgcgccttcgcacccgacgtggtcgccaccacctccttcaccgcttccatcgcg
cacgcgctggagttgaccgcgctggcgaaaaagatcaacccgcaggtggtcaccgtgcac
ggcaacgtccacgccaccttctgttacgacgagatcctgaaggcggagcacgacacggtc
gacttcgtggtgcgcggcgagggggaggtcaccctggtcaagctgctcgactgcctgaat
gccggcggcgaccccgccaccgtgcccgggctttccttctggcgcgacggcgccgtggtc
gcgacgccgaaggccgcccccatcgccgacctcgactcgctccccatggcctgggacctg
gtggagtggcccatctaccgctaccgcgccaagaacaatgcgcgtctggcgatcgtctcc
tcctcgcgcggctgcatggagaagtgctcgttctgctcgcagcagctcttttgggagcgc
tcctggcgcgcgaggagtgccgagaacttcgtggcggaactggagcttctccgcgacagc
tacggcgtcgaggtcgccatgctctccgacgagatcccgacgttcgaccgcgagcgctgg
gtgcgcatcctcgacctgatgatcgaacgcaaggtcggcgtgaagctcctcatggagacc
cgcgtcgacgacatcctgcgcgacgcggacatcatggataagtaccgcgaggcgggcgtg
gagcacatctacgtcggtgtggaagcgggggaccaggaaaccctggacctcttcaacaag
aacaccaaggtggagcagtccaaggcggccatcgacatcatcaacaacgcagacatcgtg
tcggagacctccttcgtgctggggatgccggacgacacccccgagagcatcgcgaagacc
atcgagctcgccaagcactacaacccggacatggccttcttcctcgccatcgcaccgtgg
ccctacgccgagctctaccccgagctggagccgtacgtggcgaccacggacttccgcaag
tacaacctggtggaaccggtgatcaagccgaaaaacatgacgctggaggagctggagcgc
gagctgggcagggcgagccagaagttcttcatgcacaagttccagaacctgcaccagctt
tccccctggaagcaggagttcatgctcgcggtgttcgacatcctgatcaacaactcgtac
ctggccggccagatgcgggccatgatgaagcagggtgggcagatgccgcccgaggtgcag
gcgctggtcaaaagcgtgaaggggatgcagcgggcgcaggatgatgcccagtcgcacccc
cacacctttgcgccgatcccctga
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