Geomonas oryzisoli: KP004_16725
Help
Entry
KP004_16725 CDS
T07282
Name
(GenBank) radical SAM protein
KO
K04034
anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase [EC:
1.21.98.3
]
Organism
ger
Geomonas oryzisoli
Pathway
ger00860
Porphyrin metabolism
ger01100
Metabolic pathways
ger01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
KP004_16725
Enzymes [BR:
ger01000
]
1. Oxidoreductases
1.21 Catalysing the reaction X-H + Y-H = X-Y
1.21.98 With other, known, physiological acceptors
1.21.98.3 anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase
KP004_16725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
B12-binding
OSTMP1
Motif
Other DBs
NCBI-ProteinID:
QWV92805
LinkDB
All DBs
Position
complement(3815337..3816803)
Genome browser
AA seq
488 aa
AA seq
DB search
MSKILFITAPYHCWGVQVVGTWPPLHLAYLAGAACDTGHEARIFDAMNKRLSFDDIRREI
EQYQPDLVMTLDYLPVTGAISTATVPYALRILNMAKEISGQIVTLLGGPHPSFMYEEILE
DRDNRVDYIITGEPEQTLKKLLAALNGAGDPKAVKGVAYREGERTLYTGRQPHIEDLDTL
QPAWHLLDWEDYNYLVAPYGRMASILTSRGCDMECAFCSQRMFWREDWRCRKPEKVVEEM
EHLIGTYGVNFFTLIDAYPTKHRERWELFLDLVIERKLGVHLLIETRVEDIIRDADILHK
YREAGIIHVYLGAESADKDVLGSLNKGTSFEQNKRALDLLREAEIITEASFMIGFPTETW
DSIDNTIASAIYLNPDIAVFPVVTPMPFTPIHAQMKDRIRVFDYSKYNLVCPIVEPYQMT
MAEITQALGKCYMSFYSNKMQEIVEMEDGFKRKYLLSAFMLMMKDHGESFDFDGTGMERM
KEHMKKVA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagatccttttcatcaccgcaccgtatcactgctggggcgttcaggtcgtcggc
acctggcctccgctgcacctggcctatctcgccggcgccgcctgcgacaccggtcacgag
gcgcgcattttcgatgcgatgaacaagcggctgtccttcgacgacatcaggcgcgaaatc
gagcagtaccagcccgacctggtgatgacccttgactacctgccggtcaccggcgccatc
agcaccgccaccgttccctatgccctccgtattcttaatatggccaaagaaatttctggc
caaatcgtaacgctattaggcggaccccacccgagcttcatgtacgaggagattctcgag
gaccgggacaaccgcgtcgactacatcatcaccggcgagccggagcagaccctgaagaaa
ctgctggcggcgctcaacggcgccggtgaccccaaggcggtcaagggggtcgcctaccgg
gagggggagcgcaccctctataccggcagacagccgcacatcgaggacctcgacaccctg
caacccgcctggcatctcttggactgggaggactacaactacctggtagccccctacggc
cgcatggcctccatcctcacctcccgcggctgcgacatggaatgcgccttctgcagccag
cgcatgttctggcgcgaggactggcgctgcagaaaacccgagaaggtggtcgaggagatg
gaacacctgatcggcacctacggcgtcaacttcttcacgctgatcgacgcgtaccctacc
aagcaccgcgagcgctgggaactgtttctggacctggtcatcgagagaaaactcggtgtg
cacctgctcatcgagacccgggtcgaggacatcatccgcgacgccgatatcctgcacaag
taccgtgaggccgggatcatccacgtctacctgggcgcggaaagcgccgacaaggacgtg
ctggggagccttaacaaggggaccagcttcgagcagaacaagcgcgccctggatctcttg
cgcgaggcggagataatcaccgaggcctctttcatgatcggtttcccgaccgaaacctgg
gactccatcgacaacaccatagcgtccgccatttacctgaacccggacatcgccgtgttc
ccggtggtgaccccgatgcctttcaccccgatccacgcccagatgaaggaccggatccgc
gtcttcgattattcgaagtacaacctggtctgccccatcgtcgagccgtaccagatgacc
atggcggagatcacccaggccttgggcaagtgctacatgtccttctacagcaacaagatg
caggagatcgtcgagatggaggacggtttcaagcggaagtatctgctgagcgccttcatg
ctgatgatgaaagaccatggcgaaagcttcgacttcgacggcaccggcatggaacgcatg
aaggagcacatgaagaaggttgcctag
DBGET
integrated database retrieval system
