Geomonas oryzisoli: KP004_20615
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Entry
KP004_20615 CDS
T07282
Symbol
nifJ
Name
(GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
ger
Geomonas oryzisoli
Pathway
ger00010
Glycolysis / Gluconeogenesis
ger00020
Citrate cycle (TCA cycle)
ger00620
Pyruvate metabolism
ger00650
Butanoate metabolism
ger01100
Metabolic pathways
ger01110
Biosynthesis of secondary metabolites
ger01120
Microbial metabolism in diverse environments
ger01200
Carbon metabolism
ger01210
2-Oxocarboxylic acid metabolism
Module
ger_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
KP004_20615 (nifJ)
00020 Citrate cycle (TCA cycle)
KP004_20615 (nifJ)
00620 Pyruvate metabolism
KP004_20615 (nifJ)
00650 Butanoate metabolism
KP004_20615 (nifJ)
Enzymes [BR:
ger01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
KP004_20615 (nifJ)
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
TPP_enzyme_C
Fer4_7
Fer4_10
Fer4_6
Fer4
Fer4_2
Fer4_21
Fer4_16
Fer4_9
Fer4_8
Fer4_15
Fer4_18
Fer4_17
Motif
Other DBs
NCBI-ProteinID:
QWV93528
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All DBs
Position
4733556..4737107
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AA seq
1183 aa
AA seq
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MSRRMVTIDGNTAAAHVAHATNEVIAIYPITPSSVMGEISDEKSARGEKNIWGTVPSVSE
LQSEGGASGAVHGALQAGALTTTFTASQGLLLMIPNMFKIAGELTSTVFHISARAISAAA
LNIFGDHSDVMSARSTGWGMICSNNVQEVMDFALISQAATLRARVPFMHYFDGFRTSHEV
QKVEELTFDDMRFMISDELVQAHRARALTPDRPVLRGTAQNPDVYFQGRETVNAYYPKAL
EIVQEEMDKFAGLTGRKYSVAEYVGAPDAERVIIVMGSAADTVQETLETLNAAGEKVGLV
KVRLFRPFPVDAVAACLPASVKKIAVLDRTKEPGSLGEPLYLDVRTAIGEAMADGKSAFK
SYPIIVGGRFGLGSKEFTPGMAKGVFDNLKADKPKNHFVVGIKEDVTNCSLDFDPAFVNP
SAGTYSAMFFGLGSDGTVGANKNSIKIIGENTDNNVQAYFVYDSKKAGTVTVSHLRFGKG
EIRSPYLIDQADFVACHNFSFLEKYDMLSRAKVGGTFLLCSLTDDKEAVWNAMPVEVQQQ
IIDKKLKFYVINAIALGEKLGLGARINVIMQTAFFKISGIMPLDAAIASIKDAIKKSYGK
SGEKVVEMNNKAVDAALENIFEITVPATATSKIKKPAVVGAHAPQFVQEVTAQLIAGRGD
DVPVSMLPADGTFPTATSQYEKRNIAVDIPVWDESLCIQCGICSFVCPHATIRMKVYDAD
KLAGAPETFKSTDARGNEFKGMKCTIQVAPEDCTGCAACVANCPAKSKEDPKHKAINMKF
QAPLRASEAANYDFFLNIPETDPTLVKLDTLKGSQLVRPLFEYSGACAGCGETPYLKLMS
QLFGDRALIANATGCTSIYGGNLPTTPWAKNADGRGPAWSNSLFEDNAEFGFGMRLAVDK
FNQAALELIDTLSLPADLVAEIKGADQKTQAGIEAQRARVAKLKEILSASGDAAAKKLLS
IADYLVKKSVWIVGGDGWAYDIGYGGLDHVIASGKNVNLLVLDTEVYSNTGGQASKSTPM
GAVAQFAAGGKPQAKKDLAMIAMAYGNVYVAKVSLSNPAQVVKAFMEAEAYDGPSLILAY
SHCIAHGIDMATAVETQKRAVASGHWPLVRYNPDLAEQGKNPLQLDSKEPSISLEEYAYG
ENRYRVLKKNNPEAAATLMARSAELTARRFDLYKRMAEMDFGK
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcagaatggtaacaatcgacggtaacaccgctgccgcacacgtggcgcacgcc
accaacgaggtgatcgccatctacccgatcaccccttcctcggtaatgggggagatctcg
gacgagaagagcgcccggggcgagaagaacatctggggcaccgtcccctccgtctccgag
ctgcagtccgaaggtggcgcctccggtgccgtccacggcgcgctccaggccggcgccctg
accaccaccttcaccgccagccagggcctgctgctcatgatcccgaacatgttcaagatc
gcgggcgagctcacctcgaccgtgttccacatctcggcccgcgccatctcggccgccgcg
ctgaacatcttcggcgaccattccgacgtcatgtcggcccgttccaccggctggggcatg
atctgttccaacaacgtgcaggaggtcatggacttcgcgctgatctcccaggccgccacc
ctgcgcgcccgcgttcccttcatgcactacttcgacggcttcaggacctcgcacgaggta
cagaaggtcgaggagcttacctttgacgacatgcgcttcatgatcagcgacgagctggtc
caggcgcaccgcgcacgcgcgctgaccccggaccgtccggtgctgcgcggcaccgctcag
aacccggacgtctacttccagggtcgcgagaccgtcaacgcctactacccgaaggcgctt
gagatcgtgcaggaggagatggacaagttcgccggcctcaccggccgcaagtactccgtc
gccgagtacgtcggcgccccggacgccgagcgcgtcatcatcgtgatgggcagcgcagcc
gacaccgtccaggagaccctggagaccctgaacgccgccggcgagaaggtcggtctggta
aaggtgcgcctgttcaggccgttcccggtcgacgccgtcgccgcctgcctcccggctagc
gtcaagaagatcgccgtcctcgaccgcaccaaggagccgggctctctgggcgagccgctc
tacctcgacgtcaggaccgccatcggcgaggccatggccgacggcaagagcgcgttcaag
tcctacccgatcatcgtgggcggccgcttcggcctcggttccaaggagttcaccccgggc
atggccaagggcgtgttcgacaacctgaaagccgacaagccgaagaaccacttcgtggtc
ggcatcaaggaagacgtcaccaactgctcgctggactttgacccggccttcgtgaacccc
tccgccggcacctactccgccatgttcttcggcctgggctccgacggcaccgtcggcgcc
aacaagaactccatcaagatcatcggcgagaacaccgacaacaacgtccaggcctacttc
gtctacgactccaagaaggccggtaccgtcaccgtgtcgcacctgcgcttcggcaagggc
gagatccgctccccgtacctgatcgaccaggcggacttcgtcgcctgccacaacttctcc
ttcctggagaagtacgacatgctctcccgcgccaaggtgggtggcaccttcctgctctgc
tcgcttaccgacgacaaggaagcggtctggaacgccatgccggtcgaggtacagcagcag
atcatcgacaagaagctcaagttctacgtgatcaacgccatcgcgctgggcgagaagctt
ggcctgggcgcaaggatcaacgtgatcatgcagaccgccttcttcaagatctcgggcatc
atgccgctcgacgccgccatcgcctccatcaaggacgccatcaagaagtcctacggcaag
tccggtgagaaggtggtcgagatgaacaacaaggcggtcgacgccgccctggagaacatc
ttcgagatcaccgtgccggccaccgcgaccagcaagatcaagaagcctgccgtcgtgggc
gcccacgcaccgcagttcgtgcaggaagtcaccgcacagctcatcgccggtcgcggcgac
gacgtcccggtctccatgctcccggcagacggtaccttcccgaccgctacctcgcagtac
gagaagcgcaacatcgccgtcgacatcccggtctgggacgagagcctctgcatccagtgc
ggcatctgctccttcgtctgcccgcacgccaccatcaggatgaaggtgtacgacgccgac
aagctcgccggcgcaccggagaccttcaagtccaccgacgcccgcggcaacgagttcaag
gggatgaagtgcaccatccaggtcgccccggaagactgcaccgggtgcgcagcctgcgtg
gccaactgcccggccaagtccaaggaagacccgaagcacaaggcgatcaacatgaagttc
caggcgccgctcagggcatccgaggccgccaactacgacttcttcctcaacatcccggag
accgacccgaccctggtcaagctcgacaccctgaagggaagccagctggtccgcccgctc
ttcgaatactccggcgcctgcgccggctgcggcgagaccccgtacctgaagctcatgtcc
cagctcttcggcgaccgcgccctgatcgccaacgcgaccggctgcacctcgatctacgga
ggcaacctgccgaccaccccgtgggcgaaaaacgccgacggacgcggcccggcctggtcc
aactccctgttcgaggacaacgccgagttcggcttcggcatgaggctcgccgttgacaag
ttcaaccaggcggcgctggagctgatcgacaccctctccctcccggccgacctcgtcgcc
gagatcaagggcgccgaccagaagacccaggccggcatcgaggcgcagcgggcccgcgtg
gccaagctgaaggagatcctgtccgcttccggcgacgccgctgccaagaagctcctctcc
atcgccgactacctggtcaagaagtcggtctggatcgtcggcggcgacggctgggcctat
gacatcggctacggcggtctggaccacgtcatcgcctccggcaagaacgtgaacctcctg
gtgctcgacaccgaggtctactccaacaccggcggccaagcctccaagtccaccccgatg
ggcgccgtggcccagttcgcggcgggcggcaagccgcaggccaagaaggacctggccatg
atcgccatggcctacggcaacgtctacgtcgccaaggtctccctctccaacccggcccag
gtggtcaaggcgttcatggaggccgaggcgtatgacggcccgtccctgatcctggcctac
agccactgcatcgcccacggcatcgacatggccaccgccgtcgagacccagaagcgtgcg
gtcgcctccggccactggccgctggtccgctacaacccggacctcgccgagcagggtaag
aacccgctgcagctggacagcaaggagccgagcatctctctcgaggagtacgcttacggt
gagaaccgttaccgcgtactgaagaagaacaacccggaagcggccgcgactctcatggcc
cgctccgccgaactcactgcccgccgcttcgatctgtacaagcgaatggcagaaatggac
ttcggcaaatag
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