Gemmata sp. SH-PL17: VT84_09205
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Entry
VT84_09205 CDS
T04358
Name
(GenBank) C-5 cytosine-specific DNA methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges00270
Cysteine and methionine metabolism
ges01100
Metabolic pathways
Module
ges_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
VT84_09205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ges03000
]
VT84_09205
03032 DNA replication proteins [BR:
ges03032
]
VT84_09205
03036 Chromosome and associated proteins [BR:
ges03036
]
VT84_09205
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
ges02048
]
VT84_09205
Enzymes [BR:
ges01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
VT84_09205
Transcription factors [BR:
ges03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
VT84_09205
DNA replication proteins [BR:
ges03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
VT84_09205
Chromosome and associated proteins [BR:
ges03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
VT84_09205
Prokaryotic defense system [BR:
ges02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
VT84_09205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
AMV24560
UniProt:
A0A142XDR6
LinkDB
All DBs
Position
2145203..2147155
Genome browser
AA seq
650 aa
AA seq
DB search
MARAARELIIDSFAGGGGASEGIARALGRGPDIAINHNPGAIAMHAANHPRTRHLTEDVF
RVNPRQVTAGKPVGLLWASPDCRHFSRAKGGKPVEKSIRGLAWVVIKWAAEVAPRVIILE
NVREFQEWGPLCPRWDCAACQWRGTEGQVCLKRRGKRACPRCDAAAVRETEHKVPDPDRK
GVTFRQFCGRLKGLGYKVETQVLNAADYGAPTHRRRLFLIARRDKRPIVWPEPTHGDPAK
IGRDLFSSELKPWRTAAECIDWSVPCPSIFSRKKPLAEKTLKRIAMGIKRYVLDNPQPFI
VRYNTEKGASDNHSRDLGQPIGAITADPRFGLVTPIVSPLTHAGERRSHPPGEPLPTVTG
ANRGELGLVAPVIARIGQTGGNGAYSNGTDEPVTTLTSKAEHLLVAPSLVQVGYGEREGQ
SPRALDLHKPLGTAVGTPKHALVSAFLARHFGGSVGAPADAPAPTVTGGGQGKSAVVAAL
VTKHYGGMVGVPADTPLPTTTARGAQNQLTVANLVHMNHGEKQWSGTDEPMRTVTTGGHA
ALVYSFLVKYFGTAIGCEVDAPAPTVTGKDRFGLVTVEIEGEPYVIVDIGMRMLRPRELA
RAQGFGENYVLTGTNTNQVERIGNSVCPDVAAAIVRANCADMIAKGRAAA
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcacgggcggcgcgagaactgatcatcgacagcttcgccggcgggggcggggcgtct
gagggcattgcccgggcgctcgggcgcgggccggacatcgcgatcaaccacaaccccggc
gcgatcgcgatgcacgcggccaaccacccgcgcacccggcacctgaccgaggacgtgttc
cgggtgaacccgcgacaggtcacggccggcaaaccggtcggcctcctctgggcctccccg
gactgtcgtcacttctcccgggcgaagggcgggaagccggtcgagaaatcgatccgcggg
ctagcatgggtggtcatcaagtgggcggccgaggtcgcgccccgggtcatcatcctggag
aacgtgcgcgagttccaggagtgggggccgctgtgcccgcgttgggactgcgccgcgtgc
cagtggcgcggcaccgagggacaggtgtgcctgaaacggcggggcaagcgcgcgtgcccg
cggtgcgacgctgcggccgtccgggagaccgagcacaaggtgcccgacccggaccggaag
ggcgtaacgttccggcagttttgcggccggctcaagggactcgggtacaaggtcgaaacg
caggtgctgaacgcggctgactacggggcgcccacccaccgccggcgcctgttcctcatc
gcccgccgggacaaaaggccgatcgtctggccggagccgacccacggcgacccggcgaag
attggtcgcgacctgttctcctcggaactcaagccgtggcgcacggccgcggagtgcatc
gactggtcggtgccgtgtccgagcatctttagccgcaagaagccgctcgcggaaaagacc
ctcaagcggatcgcgatggggatcaagcggtacgtgctcgacaacccgcaacccttcatc
gtgcggtacaacacggagaaaggcgccagcgacaaccattccagggatctgggccagccg
atcggcgcaatcacggccgacccgcgattcggcctcgtcaccccgatcgtctcgcccctc
acccacgcgggcgagcgccgctcgcacccgccgggcgaaccgctcccgaccgtcaccggg
gccaaccgcggcgaactcggtctcgtcgcccccgttatcgcgcgcatcgggcaaacgggc
gggaacggcgcgtacagcaacggaactgacgaacccgtcaccacgctgacgagcaaagcc
gagcacttgctcgtcgcgccgtctctcgttcaagtcggttacggggagcgagaagggcaa
tcgccccgcgccctcgacctgcacaagcccctcggcaccgcggtcggaacccccaagcac
gcgctcgtgtccgcgttcctcgcgagacacttcggcggctccgtcggcgcgcctgctgac
gctccggccccgaccgtcaccggcggcggccagggcaaatcggccgtcgtcgcggcgctc
gtcaccaaacactacggtggtatggtcggcgtcccggccgataccccgctccccacgacg
accgcacgcggcgcccagaatcaactcacggtcgcgaacctggtccacatgaaccacggc
gagaaacagtggagcgggaccgacgaaccgatgcgcaccgtcacgacgggcgggcacgcg
gccctcgtttactccttcctggtcaaatacttcggcaccgcgatcgggtgcgaggtggac
gcgccggccccaacggtcacgggcaaagatcgcttcggcctcgtcaccgtcgagatcgag
ggcgaaccctacgtgatcgtggacatcggaatgcggatgctccgcccgcgcgaactggcc
cgcgcgcaggggttcggcgagaactacgtgctcaccggcacgaacacgaatcaggttgaa
agaattggcaattccgtgtgtcccgatgtcgccgcggcgatcgtgcgggccaactgtgcg
gacatgatcgcgaaaggacgggccgcagcgtga
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