Geothrix oryzae: GETHOR_04540
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Entry
GETHOR_04540 CDS
T09137
Symbol
glnS
Name
(GenBank) glutamine--tRNA ligase
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
gex
Geothrix oryzae
Pathway
gex00970
Aminoacyl-tRNA biosynthesis
gex01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gex00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GETHOR_04540 (glnS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gex01007
]
GETHOR_04540 (glnS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gex03016
]
GETHOR_04540 (glnS)
Enzymes [BR:
gex01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
GETHOR_04540 (glnS)
Amino acid related enzymes [BR:
gex01007
]
Aminoacyl-tRNA synthetase
Class I (A)
GETHOR_04540 (glnS)
Transfer RNA biogenesis [BR:
gex03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
GETHOR_04540 (glnS)
Prokaryotic type
Other AARSs
GETHOR_04540 (glnS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA-synt_1c_C
tRNA-synt_1c_C2
Motif
Other DBs
NCBI-ProteinID:
BDU68353
UniProt:
A0AA48GQJ9
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All DBs
Position
520206..521915
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AA seq
569 aa
AA seq
DB search
MSADLPIPEPKKLHFIEEIVEADRASGKHGGRVLTRFPPEPNGYLHIGHAKSICLNFGLA
KAYGGGTNLRFDDTNPVKEDVEYVDSIREDVQWLGFQWKGEHYASDYFPFLCDYAEYLIQ
QGKAYVCDLSEAEIREYRGNFHTPGRPSPYRDRSPEENLDLFRRMKAGEFSDGSRVLRAK
IDMQSGNMNLRDPLMYRIRRAHHHRTGDTWCIYPMYDYAHGVSDAIETITHSICTLEFED
HRPLYEWFLEQDAEGKFFQRPLPRQIEFARLNLTYTVMSKRRLLQLVQEGIVRGWDDPRM
PTICGLRRRGYTPEAVRAFAERVGVAKRDMVADVGLLEFCIREDQEKRAPRRMAVLRPLK
VVITNMTDAEAFEVEVANHPDDPAMGTRRLPFTRELFIDQDDFREEAPKKWFRLAPGAEV
RLRGAALVTCREVLKDAAGNVVELRCEWDAASKGGNAPDGRKVKGTLHWVSAPHAVKAEV
RLYEPLFTQEDPMDVPEGQDWKALLNPASLEVLTDARLEPSLRDARPGERFQFERTGYFA
VDPDGRPGAPVFNRTVGLKDSWSKIEAKG
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctgacctgccgattcccgaacccaagaagctccacttcatcgaggagatcgtc
gaggcggaccgcgcctcgggcaaacacggggggcgggtgctcacgcgcttcccgccggag
cccaacggctacctgcacatcggccacgccaagagcatctgcctgaacttcggcctggcg
aaggcctacggcggcggcaccaacctgcgtttcgacgacaccaaccccgtgaaggaggat
gtcgagtatgtggactccatccgcgaggatgtccagtggctgggcttccagtggaagggc
gaacactacgcctcggactacttccccttcctctgcgactacgcggaatacctcatccag
cagggcaaggcctatgtctgcgacctctccgaggcggagatccgcgagtaccggggcaac
ttccacacgccgggccggcccagcccgtaccgggaccgcagccccgaggagaacctggac
ctcttccgccgcatgaaggccggggaattctcggacggctcccgggtgctgagggccaag
atcgacatgcagagcggcaacatgaacctgcgcgatcccctcatgtaccgcatccgccgg
gcccaccaccaccgcacgggcgacacctggtgcatctatccgatgtacgactacgcccac
ggggtgtccgacgccatcgagaccatcacccactccatctgcaccctggagttcgaggac
caccgcccgctctacgagtggttcctggagcaggatgccgaagggaagttcttccagcgc
cccctcccccgccagatcgagttcgcccgcctgaacctcacctacacggtgatgagcaag
cgccgcctcctccagctggtgcaggagggcatcgtgcggggctgggacgatccccgcatg
cccaccatctgcggcctgcggcgccggggctacactcccgaggctgtgcgggccttcgcc
gaacgggtgggcgtggccaagcgcgacatggtggccgatgtgggcctgctggagttctgc
atccgggaagaccaggagaagcgggcgccccgccgcatggccgtgctgcgccccctgaag
gtggtcatcaccaacatgacggacgccgaggccttcgaggtcgaggtggccaaccatccg
gacgatccggccatggggacccgccggctgccattcacccgggagctcttcatcgaccag
gacgacttccgcgaggaagcccccaagaagtggttccgcctggctccgggcgcggaggtg
cgccttcgcggggcggccctcgtgacctgccgcgaggtcctcaaggacgccgccggcaat
gtggtggagctccgctgcgagtgggacgccgccagcaagggcggcaacgcgcccgacggc
cgcaaggtgaagggcacgctgcactgggtgagcgcgccccatgccgtgaaggccgaagtg
aggctctacgagcccctcttcacccaggaggaccccatggatgtgcccgagggccaggac
tggaaggccctcttgaacccggccagcctcgaggtgctcaccgatgcccgcctcgaaccc
agcctccgggacgcccgtcccggcgagcggttccagttcgagcgcacgggctatttcgcg
gtggacccggacggccggcccggcgcgcccgtgttcaaccggaccgtggggctgaaggat
tcgtggagcaagatcgaggcgaaaggctga
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