Geothrix oryzae: GETHOR_29190
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Entry
GETHOR_29190 CDS
T09137
Symbol
mdeA
Name
(GenBank) methionine gamma-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
gex
Geothrix oryzae
Pathway
gex00260
Glycine, serine and threonine metabolism
gex00270
Cysteine and methionine metabolism
gex00450
Selenocompound metabolism
gex01100
Metabolic pathways
gex01110
Biosynthesis of secondary metabolites
gex01230
Biosynthesis of amino acids
Module
gex_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
gex00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GETHOR_29190 (mdeA)
00270 Cysteine and methionine metabolism
GETHOR_29190 (mdeA)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
GETHOR_29190 (mdeA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gex04147
]
GETHOR_29190 (mdeA)
Enzymes [BR:
gex01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
GETHOR_29190 (mdeA)
Exosome [BR:
gex04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
GETHOR_29190 (mdeA)
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Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
BDU70818
UniProt:
A0AA48H2P6
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All DBs
Position
complement(3257781..3258974)
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AA seq
397 aa
AA seq
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MPKPWGPTTTAIHAGKHFNPTRAVTTPIFQTSVFELLENREGAEFAAAIEPPAFYTRWGN
PNSSEVEAVLAELEGAERALVTASGMAAFALVFEAFLKAGDHLVAPAAIYLGTEQLIRRW
EAQRGLTVTWIQNTLDLDEWAAALRPETRMIWVETPSNPTLALTDLAAVAALGKKHGIRT
VADNTFPSPIHTKPLRFGFDLSVASATKYLAGHSDVVAGVIAGSDADVVTCWHLTKVMGP
TLDPMAAWLLHRGLKTLALRVRRASDNAQALAQWLLWQPHVARVDYPGLPTHPGHEIAAR
QMETGFGAMIGFELRAGLRAGQCFCEALEVITRGVSLGGVESLIQHPASMSHLKTAPEVK
ARLGISDGLLRFSVGIEDQPDLIADLEKGFQAAAEAR
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagccctggggacccaccaccaccgccatccacgccgggaagcacttcaacccc
acccgggccgtgaccacgcccatcttccagacctcggtcttcgagctgctggagaatcgc
gagggcgcggagtttgcggccgccatcgagccgcccgccttctacacccgctggggcaac
cccaacagcagcgaggtcgaggccgtgctggcggagctggagggcgccgaacgggccctg
gtgacggcctccggcatggcggccttcgcgctggtcttcgaggccttcctcaaggcgggc
gatcacctggtggcccccgccgccatctacctgggcaccgagcagctgatccgccgctgg
gaggcccagcggggcctgacggtcacctggatccagaacacgctggatctggacgagtgg
gcggcggccctccgccccgagacccgcatgatctgggtggagacgccctcgaatcccacc
ctggccctcacggacctggcggccgtggcggccctcgggaagaagcacggcatccgcacc
gtggccgacaacaccttccccagtcccatccacacgaagcccctgcgtttcggcttcgat
ctcagtgtggcctcggccaccaagtacctggcgggccactcggatgtggtggcgggcgtg
atcgcgggttccgacgcggatgtggtgacctgctggcacctcaccaaggtcatggggccc
accctggatcccatggccgcctggctgctgcaccggggcctcaagacgctggccctgcgg
gtccgtcgggcctcggacaacgcccaggccctggcccagtggctgctctggcagccccat
gtggcgcgggtggactacccgggcctgcccacccatcccggccacgagatcgccgcccgc
cagatggagacgggcttcggcgccatgatcggcttcgagctgcgggctgggctgcgcgcg
ggccagtgcttctgcgaggccctggaggtgatcacccgcggcgtgagcctgggcggcgtg
gaaagcctcatccagcacccggcgagcatgagccacctgaagaccgcgcccgaggtgaag
gcccgcctgggcatctcggacggcctgctgcgcttctccgtgggcatcgaggatcagccc
gacctcatcgccgacctggagaagggcttccaggccgccgcggaggcccggtga
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