Geospiza fortis (medium ground-finch): 102032848
Help
Entry
102032848 CDS
T03755
Symbol
CLP1
Name
(RefSeq) cleavage and polyadenylation factor I subunit 1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102032848 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfr03019
]
102032848 (CLP1)
Enzymes [BR:
gfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
102032848 (CLP1)
Messenger RNA biogenesis [BR:
gfr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
102032848 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
ATP_bind_1
AAA_22
CbiA
nSTAND3
AAA_18
Motif
Other DBs
NCBI-GeneID:
102032848
NCBI-ProteinID:
XP_014164730
UniProt:
A0A6I9ZC24
LinkDB
All DBs
Position
Un
AA seq
237 aa
AA seq
DB search
MVVGPTDVGKTTVCRLLLNYAVRLGRRPTFVELDVGQGSVSIPGTMGALYIERPADVEEG
FSLQAPLVYHFGSTTPGTNIKLYNKITSCLADVFNQRCEVNRRASVSGCVINTCGWVKSS
GYQALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECR
DERIREYFYGFPGRVAGFIVVTGVDLERQVFTVLSPAPRPLPENFLLIMDIRFMDLK
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggtggtggggcccaccgacgtgggcaagaccaccgtgtgccgcctgctgctcaactac
gccgtgcgcctgggccgccggcccaccttcgtggagctggacgtggggcagggctcggtg
tccatccccggcaccatgggcgcgctgtacatcgagcgcccggccgacgtggaggagggc
ttctccctgcaggcccccctcgtctaccacttcggctccaccacgcccggcaccaacatc
aagctctacaacaagatcacatcgtgcctggccgacgtcttcaaccagcgctgcgaggtg
aaccggcgggcgtcggtgagcggctgcgtcatcaacacctgtggctgggtcaagagctcg
ggctaccaggcgctggtgcacgccgcctccgccttcgaggtggacgtggtggtggtgctg
gaccaggagcgcctctacaacgagctcaagcgggacctgccccactttgtgcgcaccgtg
ctgctgcccaagtccggcggcgtggtggagcgctccaaggacttccgccgggagtgccgg
gacgagcgcatccgcgagtacttctacggcttccccgggcgcgtggccggcttcatcgtg
gtcacgggcgtggacctggagcgccaggtcttcaccgtgctgtccccggccccacgcccc
ctccccgagaacttcctgctcatcatggacattcgcttcatggacctcaagtag
DBGET
integrated database retrieval system
