Geospiza fortis (medium ground-finch): 102034196
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Entry
102034196 CDS
T03755
Name
(RefSeq) vascular endothelial growth factor receptor kdr-like
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04010
MAPK signaling pathway
gfr04020
Calcium signaling pathway
gfr04510
Focal adhesion
gfr04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102034196
04020 Calcium signaling pathway
102034196
09133 Signaling molecules and interaction
04518 Integrin signaling
102034196
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102034196
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gfr01001
]
102034196
Enzymes [BR:
gfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
102034196
Protein kinases [BR:
gfr01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
102034196
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
I-set
Ig_3
Ig_VEGFR-1-like_5th
VEGFR1-3_N_Ig-like
Pkinase
ig
Ig_2
VEGFR-1-like_Ig-like
V-set
VEGFR-2_TMD
Ig_PDGFR_d4
Ig_4
Ig_5
C2-set_3
Ig_SEMA-3_4_7A
Haspin_kinase
Poly_export
Motif
Other DBs
NCBI-GeneID:
102034196
NCBI-ProteinID:
XP_005428786
UniProt:
A0A8N5EWH3
LinkDB
All DBs
Position
Un
AA seq
1309 aa
AA seq
DB search
MLPRALLAVCALQGLLLLHGLAEEELLQKPRLSTSKDQIVISPGDTLKIKCWGAPSVSWQ
LREDNPRVHVSGCRDGPRLGCSQLVLRRATANDTGYFSCALSSTPEHQGLVARVYVFVQD
YRNPFVEMHPEHPDIIYITDDKKTVLIPCRVTSPDIRPKLIQYPSSAEINFKKMVWDPRR
GFFIPSHSFVPSGILTCSAQVNGSVFNSYYVAQRLEGRIQNLALKASARKLLVGETLKLE
CKAETFINGRVEFIWTCPRGTHPHPRRTMDQSDVVYKAGSSLVIENVTMEDGGLYICRTF
NVTRLEANVTVTVYEKPYITVSHKKGPYYEITSGHKSLKLAAKVDAFPRPTVTWYKDGKL
IKDNHTCYEPDPLRYRLGIRDVRPKHAGNYTMVLSNPKYGLYKNLTMQLVVTERPKIYEK
ETDFHKVVKVELRSKHEIQCTASGNPEPRIEWKWQPCSLTDTLCNPEGPKVVVSENTVIG
NKIRSIENTPMRQEDKPKIVSTLSMEDSSASGIYYCVAANKVGEEERSIAFYVSDVPSGL
QTPSQVTAIVGNDVQLTCRASKYIYTHLAWYYPTSEAAPSHSVVRKMDKYSISLTLLIPN
VTREQSGLYKCRAQNEQNSTDTLEQHSQLLVRAKAAPVVIQNLTDLEVNISGKILLECKV
SGTPEPQVTWRKNGYPISAASGISMENNTLVIERVKKDDEGLYECWASNELGQDSTSAFI
RIQGSEEKSNIEVIILVCTGLAATLFWLLLTLLIRKLRKPDATDIKTGYLSIIMDPEEMP
LDEQCERLPYDSSKWEFPRDRLRLGKTLGHGAFGKVVEASAFGIDKSSTCKTVAVKMLKE
CATTNECKALMSELKILIHIGHHLNVVNLLGACTKAGGPLMVIVEYCKYGNLSNYLRGKR
GDFIAYKSQENSDQAEKSLDESSSDLTELIKRRLESVASTGSSASSGFIEDKSYSDSEDD
EEDAEDLYKRPLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFG
LARDIYKDPDYVRKGDARLPLKWMAPEAIFDKIYTTQSDVWSFGVLLWEIFSLGASPYPG
VQIDEDFCRRLKEGTRMRSPEYSTPEVYQTMLDCWHGVPTERPTFTELVERLGDLLQANV
QQDGKDYIPLNITLCPDGESNSKTCPVEENLNNGVNRWSAVETGNNSKKRPLSVKTFDEV
PVEKEKVMHEESDSGVVLTSAEIKSPKRLEIRSWPYGIMALARRAVSRSKESILADHETV
KYQPAVQVEEDTMEFPLEDSVLLPMDPSLECHSPPPDYNSVMHYSAPPV
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgctgccccgggccctcctggccgtgtgtgccctgcaggggctgctgctgctgcacggt
ctcgctgaggaagagcttcttcaaaaaccaaggctgagcacttccaaggaccaaatcgtc
atctcaccaggagacaccctaaaaataaaatgctggggagccccgtcggtgagctggcag
ctgagggaggacaacccgcgcgtgcacgtgagcggctgccgcgatggccccaggctgggc
tgcagccagctcgtcctcaggagagccacggccaacgacaccggctacttcagctgtgcc
ctcagcagcacccccgagcaccaggggctcgtggccagggtctatgtctttgtccaagac
tacaggaatccatttgtggagatgcacccggaacaccctgacatcatctacatcacggat
gataagaaaacagtgctgatcccctgccgggtcacctcgccagacatcagacccaagctc
atccagtacccttcttctgcagagatcaacttcaagaagatggtgtgggaccccaggaga
ggctttttcatcccctcccactcctttgtgccctctgggatcctcacatgctcggcccaa
gtcaacggcagcgtcttcaactcctactacgtggcccagagactggagggcagaatacag
aacctggctctgaaggcaagtgccagaaagctgctggttggagaaactctcaagctggag
tgcaaagcagagacctttatcaacgggcgcgtcgagttcatctggacgtgcccccgtggc
acacacccccaccccaggagaacaatggaccagagtgatgtggtgtacaaagccggcagc
agcctggtaattgaaaatgtcaccatggaagatgggggcttgtacatctgcaggacattc
aatgtcaccaggctggaggccaatgtcactgtcactgtgtatgaaaaaccctacatcaca
gtctcacacaagaaagggccttactacgagattacctcaggacacaagtccctgaagctg
gctgccaaggtggacgcctttcctcggcccactgtcacctggtacaaggatggcaaactg
atcaaggacaaccacacctgctacgagccagatccactgagatacagactgggaatacga
gatgtgagaccaaaacatgctgggaactacaccatggtcctgagcaaccccaaatacggc
ctctacaagaacctcaccatgcagctggtggtgacagagagacccaagatctatgaaaag
gaaacagattttcataaggttgtgaaggtggaattgagaagcaaacacgaaatccagtgc
acagcaagtgggaatcctgagcccaggatcgagtggaagtggcagccctgcagcctcaca
gacaccctgtgcaatcctgaggggccaaaagttgtggtttcagagaacacagtcatagga
aacaagatcaggagcattgagaacacccccatgaggcaggaggataaaccaaagattgtg
agcaccctgagcatggaggacagcagtgcctcggggatctattactgcgtggctgccaac
aaggtgggcgaggaggagcggagcatcgccttctatgtgtcagatgtgccctctgggttg
caaacaccttcccaagtcacagccatcgtgggcaatgacgtccagctgacctgccgggcc
tccaagtacatctacacccacctggcctggtactaccccacctcagaggcagctcccagc
cactctgtggtcaggaaaatggacaaatattccatctccttgaccctgctcattcccaac
gtcacgagggagcagagtggcctctacaagtgccgagcccagaacgagcagaacagcacg
gacacgctggagcagcacagccagctcctggtcagagcgaaggcagcgccggttgtgatc
cagaacctcacggacctggaggtcaacatcagcggcaagatcctgctggagtgcaaggtc
agtgggaccccagagcctcaggtcacctggaggaagaatggctaccccatctcagcagca
tcaggaatttccatggagaacaacaccctggtgattgagagagtgaagaaggacgacgag
gggctctacgagtgctgggcctccaacgagctgggccaggacagcacatcagccttcatc
agaatccagggttctgaggagaaatccaacattgaggtgatcatcctggtgtgcacaggg
ctggctgccacgctcttctggctcctgctgacgctcctcattcgcaaactgagaaagccc
gacgccacagacattaaaacaggatacctgtcaattatcatggaccccgaggagatgccc
ctggacgagcagtgtgagcgcctgccctacgacagcagcaaatgggagttccccagggac
aggctgcgcctgggtaaaactctgggtcatggtgcttttgggaaggtggtggaggcgtct
gcttttggcattgataaatcttcaacctgcaaaacagttgccgtaaaaatgctgaaagaa
tgtgcaactacgaatgaatgcaaggctctaatgtctgagctgaagatcctcatccatata
ggacatcacctgaatgtggtcaacctgctgggagcctgcaccaaagctggaggtccttta
atggtcatagtggaatattgcaaatatggaaatctgtccaactatctcagagggaaaaga
ggagatttcattgcatacaagtcccaggaaaactctgaccaagcagagaagagtctggat
gagtccagcagtgatttgactgaactgatcaagaggcgcctcgagagtgtggccagcaca
ggcagctctgccagctcaggatttattgaagataagagttacagtgactcagaagatgat
gaagaagatgctgaggatctgtacaagaggcccttgactctggaggatctgatttgctac
agcttccaggtggcaaaaggcatggagttcctcgcctcccgaaaatgcatccatcgggat
ctggcagccaggaacatcctcctgtccgagaacaacgtggtcaagatctgtgacttcggc
ctcgccagggacatttacaaagaccccgactacgtacggaagggagatgcacggcttccc
ctcaagtggatggctccagaagctatttttgacaaaatttacaccacgcagagtgacgtg
tggtctttcggagtgctgctgtgggaaatattttctctaggtgcctctccataccctggg
gtgcagatagatgaggatttctgccggcggctcaaggaggggacccggatgagatctcca
gaatattccacccctgaagtctaccagaccatgctggactgctggcacggggtgcccacg
gagaggccgacgttcaccgagctggtggagcgcctgggggatctcctgcaggccaacgtg
cagcaggatggcaaagactacattccactgaacatcaccttgtgtcctgatggagaatcc
aactccaaaacctgccctgtggaagaaaacttgaacaatggagtgaatcgctggagtgca
gtagaaactggaaacaacagcaagaagagacccctgagtgtgaagacttttgatgaggtg
ccagtggaaaaggagaaagtgatgcatgaggagtctgacagtggggtggtgctgacctca
gcggagataaaaagccccaagaggttggaaatccgttcctggccctatgggatcatggct
ctggcgaggagagctgtcagcaggagcaaggaatccatcctggctgaccacgagactgtc
aagtaccagccagcagtgcaggtggaagaggacaccatggagttccccctggaagactct
gtcctgctccccatggatcccagcctggagtgccacagccctcccccagactacaactct
gtcatgcactactcagcccccccagtgtaa
DBGET
integrated database retrieval system
