Geospiza fortis (medium ground-finch): 102036710
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Entry
102036710 CDS
T03755
Symbol
GLB1
Name
(RefSeq) galactosidase beta 1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr00052
Galactose metabolism
gfr00511
Other glycan degradation
gfr00531
Glycosaminoglycan degradation
gfr00600
Sphingolipid metabolism
gfr00604
Glycosphingolipid biosynthesis - ganglio series
gfr01100
Metabolic pathways
gfr04142
Lysosome
Module
gfr_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
102036710 (GLB1)
09103 Lipid metabolism
00600 Sphingolipid metabolism
102036710 (GLB1)
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
102036710 (GLB1)
00604 Glycosphingolipid biosynthesis - ganglio series
102036710 (GLB1)
00511 Other glycan degradation
102036710 (GLB1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
102036710 (GLB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gfr04147
]
102036710 (GLB1)
Enzymes [BR:
gfr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
102036710 (GLB1)
Exosome [BR:
gfr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102036710 (GLB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
102036710
NCBI-ProteinID:
XP_005424029
LinkDB
All DBs
Position
Un
AA seq
699 aa
AA seq
DB search
MALCQKYLSLRACKRFFQRSSSQQFSAMNGASVFSTDLLNEPERSFGIDYESNTFVKDGK
PFRYISGSIHYSRVPSYYWKDRLLKMKMAGLDAIQTYVPWNYHETQMGTYDFFGGKDLEY
FLQLANDTGLLVILRAGPYICAEWDMGGLPAWLLEKKSIVLRSSDSDYLEAVERWMGVLL
PKMRPYLYQNGGPIIMVQVENEYGSYFACDYDYLRFLLKLFRLHLGDEVVLFTTDGASQF
HLKCGALQGLYATVDFAPGGNVTAAFLAQRSSEPKGPLVNSEFYTGWLDHWGHRHSVVPA
ETIAKTLNEILARGANVNLYMFIGGTNFAYWNGANMPYMPQPTSYDYDAPLSEAGDLTEK
YFALRKVIGMYKELPEGLIPPTTPKFAYGKVRLQKAGTVLEVLDGLSRSGPVRSTYPLTF
VELKQYFGYVLYRTTLPKNYVEPTPLSSTLNGVHDRAYVSVNGVPQGVLEREKSLKINIT
GQAGANLDILVENMGRVNFGRYNNDFKGLVSNLTLAQDILVGWEIYPLDIDGAVNYDIIY
PLPNQKTSAVKALSYEVPTFYTGTLSIPGGIPDLPQDTYVNFPGWTKGQIWINGFNLGRY
WPARGPQLTLYVPRNVLVASAPNNITVLELEHSPCSAQACDIEFVDEPNINATLLHETDK
PPLFVREMWTRHLQCKYGIWSELVHKNQKFYTNPLWKFF
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggctctctgccagaagtatctgtccctgagggcatgtaaacggttttttcaacgttca
tcatctcaacagttctctgccatgaatggagcaagtgtcttttccacagacctcttgaat
gaacctgagaggagttttgggattgattatgaatccaacacctttgtcaaggatgggaaa
cctttccgttacatctccggtagcattcactactcgcgggtgccctcgtattactggaaa
gaccgcctgctgaagatgaagatggcagggcttgatgccattcaaacgtatgtcccatgg
aactaccacgaaacccagatgggcacgtatgacttttttggtggcaaagatctagagtat
ttcctgcagcttgccaatgacactggattgcttgttatcctgagagctggaccttacatc
tgtgcagaatgggacatgggaggtcttcctgcatggctgttggaaaagaaatctattgtt
ctcaggtcttctgattcagattacctggaagcagtagagagatggatgggtgtccttttg
ccaaagatgagaccttatctctatcaaaatggaggtccaatcatcatggtgcaggtagag
aacgagtacggaagctacttcgcttgcgactacgactacctgcgcttccttctgaagctc
tttcgcctgcatcttggggatgaggtggtgctcttcacaactgatggtgccagccagttt
cacttgaaatgtggggctctccagggtctttatgcaacggtggactttgctccaggtggc
aatgtcacagcagcattcttagctcaaaggagcagtgaacccaagggccctttggttaat
tctgagttttatactggatggttggatcactgggggcaccgtcattctgttgtgcccgca
gaaactatagctaaaacacttaatgaaatcctggcacgtggtgctaacgttaacctgtac
atgtttataggtgggactaactttgcctattggaatggtgctaatatgccttacatgcct
cagcccactagttatgactatgatgctcccctgagcgaggcaggagatctgacagaaaag
tattttgccttgagaaaagtcattggtatgtataaggagttaccagaaggtcttatccct
ccaacaacacccaaatttgcatacgggaaggttcgcttgcagaaggcaggcactgtgttg
gaggttcttgatggactgtcacgttctggaccagtgagaagtacttacccattgactttt
gttgagctgaagcagtattttggatatgtattgtatagaactacacttccaaagaactat
gtggagccaacaccactgtcttcaactttaaatggagtccatgatcgtgcctatgtctct
gtcaatggggtacctcagggtgtccttgaaagggagaaatcacttaagataaatataact
gggcaggctggagcaaatctcgacatcttggtagagaatatgggccgagtcaactttggt
agatacaataatgactttaagggtctagtttcaaatttaactcttgctcaagatatactt
gttggatgggaaatctatcctctagacatagatggagcagtgaactacgacattatttat
ccccttcctaaccagaagacatctgctgtcaaagcactgagttacgaagtacctactttt
tacactggtactctttcaattcctggagggattccagacttgccacaagacacctatgtc
aattttcctggttggacaaaggggcaaatttggatcaatggctttaatcttggtcgctac
tggccagcccgtggtcctcagctgaccctttatgttccaaggaatgtgcttgttgcctcg
gcaccaaacaacataacggtgttggagctggagcactctccttgcagcgcccaggcctgc
gacatagaatttgtagatgaacctaatatcaatgcaaccctactgcatgaaactgataaa
cccccactctttgttagagagatgtggacgaggcatctacagtgcaagtacggtatttgg
tcggaattagttcataaaaaccagaagttttacactaatcccctctggaagtttttttga
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integrated database retrieval system
