Geospiza fortis (medium ground-finch): 102037439
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Entry
102037439 CDS
T03755
Symbol
PCCA
Name
(RefSeq) propionyl-CoA carboxylase alpha subunit
KO
K01965
propionyl-CoA carboxylase alpha chain [EC:
6.4.1.3
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr00280
Valine, leucine and isoleucine degradation
gfr00630
Glyoxylate and dicarboxylate metabolism
gfr00640
Propanoate metabolism
gfr01100
Metabolic pathways
gfr01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
102037439 (PCCA)
00640 Propanoate metabolism
102037439 (PCCA)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
102037439 (PCCA)
Enzymes [BR:
gfr01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.3 propionyl-CoA carboxylase
102037439 (PCCA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
PCC_BT
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp
RimK
ATP-grasp_5
HlyD_3
ATP-grasp_3
ATPgrasp_ST
SLT_beta
HlyD_D23
GARS_A
RnfC_N
PASTA
Motif
Other DBs
NCBI-GeneID:
102037439
NCBI-ProteinID:
XP_014163746
LinkDB
All DBs
Position
Un
AA seq
762 aa
AA seq
DB search
MGNEGRIPRGMPSASPREYAHTLCHHRFVKCACQAPEPPMPPVLGAPGSAWLSLHSRAGS
RAPLRETQRWDTLCSRWCLITSHKLYSSVYDPNEKTFEKLLIANRGEIACRVIKTCKKMG
IKTVAIHSDVDTNAVHVKMADEAVCVGPAPTSKSYLNMDAIMEVIRKTRAQAVHPGYGFL
SENKEFARRLASEGVTFIGPDTHAIQAMGDKIESKLLAKNAKVNTIPGFDGVVKDADEAV
RIAREIGYPVMIKASAGGGGKGMRIAWDDEETREGFRFSSQEAASSFGDDRLLIEKFIDN
PRHIEIQVLADKHGNALWLNERECSIQRRNQKVVEEAPSTFLDPETRRAMGEQAVALAKA
VKYSSAGTVEFLVDSSKNFYFLEMNTRLQVEHPVTECITGLDLVQEMIRVAKGYPLRHKQ
ADIPINGWAVECRVYAEDPYKSFGLPSIGKLSQYQEPLHVPSVRVDSGIQQGSDISIYYD
PMISKLITYGSNRAEALKRMEEALDNYVIRGVAHNISLLREVIVHPRFVQGDISTKFLPE
VYPDGFKGHKLTDLERRQLLATAASLYVAEQLRSQRFLGTPRIPIAKSKRSSWELSVHLG
DGIYPVAVSKHGSSFSVEVDGMKLNVTSEWNLASPLLSVTIDGTQRTIQRISRNASGETS
IQFLGTVYKLQILTKVAAELSKYMPEKAAEDTSSILRSPMPGTVVAVSVKPGDMVSEGQE
ICVIEAMKMQNSMIAAKTGKVKAVHCKAGDTVGEEDLLVELE
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgaggggcgaattcctcgtggaatgcccagcgccagccctcgggagtacgcg
cacacgctgtgccaccatcgctttgtgaaatgcgcctgccaggctcccgagcctccgatg
cccccggtgctgggagctcctgggagcgcctggctctccctgcacagccgggcggggtcc
cgtgcgccccttcgggagacgcagcggtgggacacactgtgttcaagatggtgccttata
acttcacataaactctattcgtctgtgtatgatccaaatgaaaagacttttgaaaaactg
cttattgccaacagaggagagattgcatgccgagtcatcaaaacgtgtaagaagatgggg
attaaaacagttgccatacacagtgacgtcgacaccaatgctgttcatgtgaaaatggcg
gatgaagctgtctgtgttggcccagctcccaccagcaaaagctacctcaacatggatgcc
atcatggaagtcattaggaaaaccagggcccaagctgtacacccgggatatggatttctt
tcagaaaataaagaatttgctcggcgtttggcatcagaaggtgtcaccttcattggacct
gacacacatgctattcaagctatgggagacaagattgaaagcaaattgttagccaagaat
gcaaaggtcaacacgatccctggctttgatggagtagtcaaggatgcagatgaagctgtc
agaattgcaagggaaattggctaccctgtcatgatcaaggcctcagcaggtggtggtggg
aaaggcatgagaatcgcttgggatgatgaagagaccagggaaggttttcggttttcatct
caagaagctgcttcaagttttggtgatgatcgcttactgatagaaaagttcattgataac
cctcgtcacatagaaatccaggttttggcagataaacatggcaatgccttgtggttgaat
gaaagagaatgctccattcaaaggagaaaccagaaggttgtggaggaagcaccaagcact
tttctagaccctgaaactcgaagagcaatgggagaacaagcagtagctcttgccaaagca
gtaaagtattcctctgctggaacagtagaattccttgtagactccagtaagaatttctac
ttcttggaaatgaatactagacttcaggttgaacatcccgtcacagaatgcattaccggc
ctggacttagtccaagaaatgatccgtgttgccaagggttaccctctcaggcacaaacag
gctgatattcccatcaatggctgggcggttgaatgtcgagtttatgctgaggacccctac
aaatcttttggcctaccatccattggtaaactgtctcagtatcaggaaccattgcatgtg
ccaagtgtgcgtgttgacagtggcatacaacaaggaagtgacattagcatttattatgat
cccatgatctcaaaactgattacctatggctctaatagagccgaagcactgaaaagaatg
gaagaagctttggacaactatgtaattcgaggtgtggctcacaatatttctttactgcga
gaagtgatcgtccatccacgctttgttcaaggagacatcagcactaaattccttcctgaa
gtttaccctgatggttttaaaggacacaagttgacagatcttgaaagaagacaactactg
gcaacagcagcatctttgtatgtggctgagcaactgagatcacagcgatttttagggact
ccaagaattcctattgctaaatcaaagagaagtagctgggagctctctgtgcatctagga
gatggaatttacccagttgcagtttcaaagcatggctcatcattttctgtggaagttgat
gggatgaaactaaatgtgaccagcgagtggaacctggcttcacccttgttgtctgtcacc
attgatggcactcagaggaccatacagcggatttctcggaatgcctctggagagaccagc
attcagtttctaggcacagtgtacaaattgcaaatcctgacgaaggttgctgcggagctg
agcaagtacatgccagagaaagcagcagaggacacctccagcattttgagatctcccatg
cctggaacagtggtggcagtttctgtcaagcctggggacatggtttcggaaggtcaagag
atttgtgtaattgaagcaatgaaaatgcagaacagtatgattgctgctaaaacaggcaag
gtaaaagctgtccactgcaaagctggggacaccgttggagaagaagatctgctggtggaa
ctggaatga
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