Geospiza fortis (medium ground-finch): 102037819
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Entry
102037819 CDS
T03755
Symbol
SPAM1
Name
(RefSeq) sperm adhesion molecule 1
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr00531
Glycosaminoglycan degradation
gfr01100
Metabolic pathways
gfr04142
Lysosome
Module
gfr_M00076
Dermatan sulfate degradation
gfr_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
102037819 (SPAM1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
102037819 (SPAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
gfr02042
]
102037819 (SPAM1)
00536 Glycosaminoglycan binding proteins [BR:
gfr00536
]
102037819 (SPAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gfr00537
]
102037819 (SPAM1)
Enzymes [BR:
gfr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
102037819 (SPAM1)
Bacterial toxins [BR:
gfr02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
102037819 (SPAM1)
Glycosaminoglycan binding proteins [BR:
gfr00536
]
Heparan sulfate / Heparin
Enzymes
102037819 (SPAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gfr00537
]
Enzymes
102037819 (SPAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_56
DUF4964
Motif
Other DBs
NCBI-GeneID:
102037819
NCBI-ProteinID:
XP_005420969
UniProt:
A0A6I9HGH4
LinkDB
All DBs
Position
Un
AA seq
586 aa
AA seq
DB search
METVRQSFGICVTCTYPVASGVVFATLLVSCCSSLNIRARPLVSNSPFLSIWNAPTELCT
EKTGVQLDMNFFPLIGSTLKTSIGQNITLFYPDRLGYYPYKNEVTGEAFNGGLPQLSLLE
NHLKKAKEDIQFYIPSDEQLGLAVIDWENWRPVWIRNWGSKDIYRQESIELVQQRDLSLS
EAEARAIAKMEFEFAAKSFMLETLKLGIETKPNRLWGYYLYPDCYNYDYKQNPHNYTGAC
LDIEIERNNELSWLWEKSTALYPSIYLETALKSSRNAQLFVRHRVQEAIRNSYVSNSSHP
LPVFVYTRPVFTDVYEEYLSEDDLVNTIGESAALGASGIVIWGDMNLTQNKNTCRTLDNY
LRRTLTPYLINVTMAARICSQVLCQDSGACARKKWNSSDYLHLNPENIAIQMTKDGKYTL
QGQPSYQDLQTFIEKFDCHCYAGHSCEPRADINDIHYLHACISEDICIQISSNSLSNIEA
SEEKILFNRTAFSLTSESKVTLSTHPEVEDFQSTFGNNILNITTAEYNDTVTAATSYDLE
ENDTRTFSSSSSYKIRMFSLFHLILLLRTLIQMIHESENILFLDYI
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgtaagacaaagttttggcatctgtgttacctgtacataccctgtagcatct
ggtgtggtgtttgccactcttctggtttcttgctgctcgtctctgaacataagagctcgt
ccacttgtttctaattcacctttcctttctatctggaatgctcctacagaactttgtact
gaaaagactggagtgcagctggacatgaatttttttcctctaattggaagtacactaaag
acatccattgggcaaaacatcactctcttctatccagacaggcttggatactacccttac
aaaaatgaagttacaggagaggcattcaatggaggactccctcaactctcgctactggag
aatcatttaaaaaaagccaaagaggacatccagttctacattccttcagatgaacagctt
ggattggctgtcattgactgggaaaactggagacctgtgtggataaggaactggggatca
aaagatatttatagacaggaatccattgagttagttcagcagagagacctcagtctatcc
gaagccgaagccagagctatagctaaaatggaatttgaatttgcagcaaaatcctttatg
ttggaaactttgaagctgggcatagaaacgaaaccaaatcgtctgtggggatattacctt
tatccagactgttataactatgattacaaacaaaacccccacaattatacaggagcctgt
ttagatattgaaatagaaagaaataatgagcttagctggttgtgggagaaaagcacagca
ctttatccatctatctatctagagacagccttaaaatcttccagaaatgctcaactcttt
gttcgccacagagttcaggaagccattagaaattcctatgtctctaactctagtcatccc
cttccagtttttgtatatacacgtccagtattcacagatgtctatgaggaatatctctct
gaggatgacctggtaaataccattggagaatctgctgcactgggtgcttctggaattgtg
atctggggtgatatgaatttaacacaaaataagaacacctgtagaactctggacaactac
ctcaggaggactttgaccccatacctcatcaacgtcacaatggcagccagaatatgtagc
caagtgctatgccaagactctggtgcttgcgcacggaaaaaatggaattccagtgactat
cttcacttgaaccctgagaatattgcaattcaaatgacaaaggatggaaaatacacttta
caagggcagccatcatatcaggatctgcaaacattcatagaaaaatttgattgccattgt
tatgcagggcacagctgcgaacctagggctgatataaatgacatccattacctccatgct
tgcatttcagaagatatttgcattcagatatcctcaaattcactttctaacatagaagcc
tctgaagaaaagatcctgtttaacagaactgcattttcattaacctctgagagtaaggtg
acattatctacacatcctgaagtagaagatttccaatctacctttggaaataatatactt
aatataacaactgcagaatataatgacactgttacagctgccactagctatgatttagaa
gaaaatgatactcgtactttcagtagttcttcatcctataagataaggatgtttagtctg
tttcacttaattctccttttgagaaccctgatacaaatgatccatgaaagtgagaatatc
cttttccttgactatatttga
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