Geospiza fortis (medium ground-finch): 102039791
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Entry
102039791 CDS
T03755
Symbol
HLCS
Name
(RefSeq) holocarboxylase synthetase
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr00780
Biotin metabolism
gfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
102039791 (HLCS)
Enzymes [BR:
gfr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
102039791 (HLCS)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
102039791 (HLCS)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
102039791 (HLCS)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
102039791 (HLCS)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
102039791
NCBI-ProteinID:
XP_005429577
LinkDB
All DBs
Position
Un
AA seq
796 aa
AA seq
DB search
MPELVWFLDDLNRWSGLLVSPFPHPEKLLPAEHIAFVTESISAHSEDLQEGPDSSKEIVK
WSDFCSPLAYKPGEPLQLIAEASVDNFSSLGIAFLEDRLHMENGMVPHRIVSVHLEESAL
KELAKERKEEEKSTGMDAVTPAGKSGLAQAEEGKSKLEEEREKEETGGGEHHHLHLSSCH
ECLQLESSTIESVKFASAENIAELPQDCGGTGREKELQSLQKGIKRMNLAGKPPNVLIYL
GSEAAEGRLEQVKAVLRECLGAESYTLYPLRQEQVLREPWVENSLLLLIATEEPIPEGIH
RQFMRFLSKGGKILGLSSSFTFGGVQIKHKNKLRRVVHELVVSKKDSTEVKLSLLLSGCV
FEEGMKGDGGTVKVLSRLSNAAEDSVMVHLTHGSHGGEAILSQAHLELDSNSMDVQTEED
FNLLKMSNSKRYEVLREILTCLGLSCESSAIPELTPIYLLSPDEEIHLAFLKWLEGNVDA
EGLRASSKVSLKFVSSCESKVEVTPSLVPVITEMGSFSSEHFSLQTYQQHLHTKKLGKIL
LFTEVTTTTMNLLDGLMFELPEEMGLIAVAVRQTQGKGRGGNAWLSPMGCALSTLHLSIP
LHSNLGQRIPFIQHLVSLAVVEAVRSIPGYEDIELRVKWPNDIYYSDLMKIGGVLVNSTL
IETTFHILIGFGFNVSNSNPTICINDLIAKFNREEGTELKPLSADCLIARTVTVLERLIE
VFQEKGPNGVLPQYYKYWVHSGKQVRLRSVDGPMAWIVGIDDYGFLQVHQEGRGVESVHP
DGNSFDMLSNLIVPKH
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattggtctggttccttgatgacttaaacaggtggagtgggcttctggtttct
cccttccctcaccccgagaagctgctgccagcagagcacattgcttttgtgacagaaagc
atttctgctcactcagaggacttgcaggaaggacctgactcttccaaggagattgtcaag
tggtcagacttttgttcacccttggcctataaacctggtgaacctttgcagttaattgct
gaagccagtgtagataatttcagtagcctgggaatagccttcctggaagacaggctgcac
atggagaacgggatggtgccacacaggattgtttctgtccatttagaggaatcagctctg
aaggagttggcaaaggagagaaaagaggaagagaaaagcacgggcatggatgcagtaact
cctgctgggaaatcaggattagcacaagctgaggagggcaaatccaagctggaagaggaa
agggaaaaggaggaaacaggaggtggggaacaccaccacttgcacctctccagctgccac
gagtgcctgcagctggagagcagcaccatcgagtcggtgaaattcgcctctgcagaaaac
attgcggagctgccccaggactgcggcggcacagggcgggagaaggagctccaaagtctg
caaaaaggaatcaaaaggatgaacctggctgggaaacccccgaatgtcctgatttacctg
ggctccgaggctgccgaagggaggttggagcaggtgaaggcggtgctgagggagtgcctc
ggcgctgagagctacaccctgtacccgctgcgccaggagcaagtgctcagagagccctgg
gttgaaaactccctgctgctgctcattgccacagaggagcccatccccgagggcatccac
aggcagttcatgagattcctctccaaagggggcaagattcttggcctttcttcgtccttc
accttcgggggcgtgcagataaagcacaagaacaaactgaggagggtggtgcacgagctg
gtggtgtccaaaaaggacagcacggaggtgaagctcagcctgctgctcagtggctgtgtt
tttgaggaggggatgaagggagatggcggcacagtgaaggtgttgagccgactgagcaat
gctgctgaggattcagtgatggtgcacctgacccatgggagccatggaggggaagccatc
ctgtcccaggcccatttggagctggacagcaattccatggatgtgcagactgaagaggat
tttaatttgctcaagatgagcaattccaagagatacgaagttctcagggagatcctgacc
tgcctggggctgagctgtgaatccagtgcaattcctgagttaacccccatttacctgctc
tctcctgatgaggaaatccatcttgctttcctgaaatggctggaggggaacgtggatgct
gaggggctgcgggcatccagcaaggtgtccctgaagtttgtttcatcctgtgagtccaag
gtggaggtgactccatccctcgtgcccgtgatcacggagatggggagcttctcctcagag
catttcagcctccagacctaccagcagcatctccacaccaagaagctggggaagatcctt
ctcttcactgaggtgaccacgacaaccatgaatcttctggacgggttaatgttcgagttg
cctgaggagatgggtttaatagcagtggctgttcgacaaacacaagggaaaggtcgtggt
gggaacgcttggctcagtcccatgggctgtgccctgtccactctgcacctctccatccct
ctacattccaacctgggccagagaattccttttatccagcacctggtgtccttggcagtg
gtagaggcagtcagatccatcccaggatatgaggacatcgagctgcgagtgaagtggcca
aatgatatttactacagtgacctgatgaagattggtggagtcctggtaaactcaacgctc
attgaaacaacatttcatattctcattggctttgggtttaatgtgagtaacagcaacccc
accatctgcatcaatgacctcattgcaaagtttaacagggaagaggggacggagctgaag
cctctgagtgcagattgcctcattgcaaggactgtgactgtgctggagaggctcattgag
gtgttccaggagaaggggcccaatggagttcttccccagtactacaagtattgggtacac
agtgggaagcaggtgaggctccgcagcgtggacggccccatggcctggatcgttggcatc
gatgactacggattcctccaggtgcaccaggagggccggggcgtggagtcggtgcaccct
gacggcaactcctttgacatgctgagcaacctcatcgtccccaagcactga
DBGET
integrated database retrieval system