Geospiza fortis (medium ground-finch): 102040542
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Entry
102040542 CDS
T03755
Symbol
SPATA5L1
Name
(RefSeq) spermatogenesis associated 5 like 1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gfr03009
]
102040542 (SPATA5L1)
Enzymes [BR:
gfr01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
102040542 (SPATA5L1)
Ribosome biogenesis [BR:
gfr03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
102040542 (SPATA5L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
RuvB_N
AAA_33
AAA_14
Vps4_C
Rad17
AAA_2
AAA_22
TIP49
AAA_7
DUF815
RNA_helicase
NTPase_1
TsaE
bpMoxR
AAA_18
AAA_3
nSTAND3
ATPase_2
AAA_19
IstB_IS21
Mg_chelatase
AAA_17
SAP
Motif
Other DBs
NCBI-GeneID:
102040542
NCBI-ProteinID:
XP_014161920
UniProt:
A0A6I9Z8X4
LinkDB
All DBs
Position
Un
AA seq
724 aa
AA seq
DB search
MGMLNIWEHVSEALNKQAALRRQKEGKEMRVANKPCRDQLCGEQARWQLERGSIYFIYGI
KLRAAALRVVLKSAALKKSTPRAVLQETIRELLRNVYVSPGYVVTVAPSPENPVVYVEIL
SASPLEEGAGLITPQTSIKIKEVITLEWYRHLSEDTAKTPVAGLDDVGKSLKEIIDLPFR
FPKTFKKLGLSVPNGVLLIGPPGVGKTLMVKAVAKELGAYLLGISGPALHGSRPGEGEEN
LRRVFEKGREMSNEGPTILFFDELDSLCPKRGSSNNAPEDRIVAQLLTLLDGVGSEGRMV
IVAATNRPDALEPALRRPGRFDREVIIGTPTVAQRRSILQLLTSDMPISAEVDLAKLAEM
TTGYVGADLTALCREAAMQAVSHSSWDSTETETMINMGDFQEAFKKIQPSSFRSAVGLTE
CKLVTWEQIGGLEDVKLKLKQSIEWPMKFPEAFARMGLSHPKGILLYGPSGCAKTTLVKA
VATSCHCSFLSVSGADLFSPYVGDSEKILSQVFRQARANTPAIIFLDEIDSILGSRALCR
TGHGVSERVLSVLLNELDGVGLKVTERRGGKLQLEAQCQEQSDEERKLEFQETLNKDFMV
VAATNRPDMLDDALLRPGRLDKMIYIPPPDLKGRLSILKICTEKIPLDTDVSLEDVAVLT
NLFSGADIENLCKEAALLALQENGLEATAVKQEHFVKSLQTVKPSLNIKDLEFYEKFSNR
ELAS
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggggatgctcaacatttgggaacatgtttcagaagccctgaacaaacaggcagcgctg
aggagacaaaaagagggcaaagaaatgagggtggcaaacaagccctgtcgtgaccagctc
tgtggagaacaagccagatggcaattagaaagggggtcaatttatttcatctatgggata
aagctgcgagcagcggccctcagagtggtcctcaagagcgccgcgctgaaaaagtcgact
cccagagcggtgttgcaagaaacaatcagagaactgctaagaaatgtgtatgtttcgcct
ggttatgttgttactgttgccccaagtcccgaaaatcccgtggtgtatgttgaaatactg
tctgcgtctcctttggaggagggagctggactgataactccccaaacaagcataaaaatt
aaggaggtgatcactttagaatggtacagacatctgtcagaagacactgcaaaaactcca
gttgcaggactggatgatgtggggaagtctttgaaagaaattattgatttgcctttccgc
tttccaaaaactttcaagaagctgggtctttctgtcccgaacggagtgctgttaattggg
cccccgggtgttgggaaaacgctaatggtaaaggcagtagcaaaggagctgggtgcgtat
ctgcttggcatcagcggcccagccctccatggttcaagaccaggagaaggtgaagagaat
ttgcgaagagtctttgaaaagggcagagagatgtcaaacgagggcccaaccattctgttt
tttgacgagcttgattctttatgtccgaagcgaggaagttcaaacaatgctcctgaagat
cgtattgttgctcagttgctgacgctgctggatggtgtagggagtgagggcaggatggtc
attgtggcagccacaaacaggcctgatgccttagagcctgcactgaggagacctggcaga
tttgacagagaggttattattgggaccccaacagttgcacagagaagatccatcctgcag
ttgctgacatctgacatgcccatttctgcagaggttgatttggctaagctggcagaaatg
acgactgggtatgttggagctgaccttacagcactctgcagagaagctgccatgcaggct
gtgtcccacagctcttgggattcaactgaaactgaaaccatgatcaacatgggagatttc
caggaagcttttaaaaaaatacagccatcctcttttcgaagtgcagttggactaacagag
tgtaaacttgtgacttgggagcaaattggtggtcttgaagatgtgaaattaaagttaaaa
cagagtattgagtggcctatgaaatttcctgaggcatttgccaggatgggcctgtctcat
cccaaggggattcttctctatgggccctctgggtgtgccaaaaccacgctggtgaaggct
gtggccacgagttgtcactgttcctttctctccgtaagtggtgctgacctcttctcacct
tacgttggagattcagagaagattttgtctcaggtttttcgccaagcaagagcaaatact
ccagcaataatattcctggatgagattgattccatcttgggatctcgggcactctgcaga
actggccatggtgtctcagagcgggttctctctgttcttctcaatgaattggatggggtt
gggctgaaagttacagaaagaagaggaggcaagctacagcttgaggctcagtgccaagaa
caaagtgatgaggaaagaaagctagagtttcaggaaactttgaacaaagatttcatggta
gttgctgcaacaaatagaccagatatgttggatgatgccttgctccgtcctggaaggctg
gacaagatgatttatattccacctccggatctgaagggaagactttccattttgaaaatc
tgcactgagaaaatcccattagatactgatgtgtcattagaagatgtggcagtcctaaca
aacctcttttctggagctgatattgaaaacctgtgcaaggaggctgctttgttggcattg
caagagaatggactcgaagcaactgctgtaaaacaggaacattttgtgaaatcattgcag
actgtaaaaccatctttaaacataaaagacttggaattttatgaaaaattctctaatcga
gaattagcctcttga
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