Geospiza fortis (medium ground-finch): 102040955
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Entry
102040955 CDS
T03755
Symbol
GRIN1
Name
(RefSeq) glutamate ionotropic receptor NMDA type subunit 1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04020
Calcium signaling pathway
gfr04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
102040955 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102040955 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gfr04040
]
102040955 (GRIN1)
Ion channels [BR:
gfr04040
]
Ligand-gated channels
Glutamate (ionotropic)
102040955 (GRIN1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan-Glu_bd
Lig_chan
SBP_bac_3
Peripla_BP_6
DUF6724
Motif
Other DBs
NCBI-GeneID:
102040955
NCBI-ProteinID:
XP_014163601
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All DBs
Position
Un
AA seq
895 aa
AA seq
DB search
MAVYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVIGLTTRMSIYSDKSIHLSFLRTVPPY
SHQANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKLETLLEEKESKSKKRNYENLDQLSY
DNKRGPKAEKVLQFDPGTKNVTALLLEAKELEARVIILSASEDDAATVYRSAAMLNMTGS
GYVWLVGEREISGNALRYAPDGVIGLQLINGKNESAHISDAVAVVAQAVHDLFEKENITD
PPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQ
VGIYNGSNVLTNDRKIIWPGGETEKPQGYQMSTKLKIVTIHQEPFVYVKPTQADGTCREE
FTINGDPVKKVFCTGPNETIPGRPTVALCCYGFCIDLLIRLAGVMNFTYEVHLVADGKFG
TQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKE
IPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALPSWC
CSDLSSPPAGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRL
RNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWD
SAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILKSHENGFMEDLDKTW
VRYQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAF
AAVNVWRKNLQDRKSGRAEPDPKKKATFRSITSTLASSFKRRRSSKDTPCRMVPQECQRD
RLAPWSQDSPGKLPPHSERPSAHHHPSCTASPRHIIPTAPGGDACVPHRQLLQLE
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggccgtctatgcaatattagttagtcaccctcctgctcccaacgatcacctaacacca
acacctgtatcatacacagctggcttctacaggatccctgtcattggtctgacaacacgc
atgtctatatactctgataagagcatccacctgtcctttttgcgcacggtcccaccctac
tctcaccaggccaacgtctggtttgagatgatgagagtcttcaactggaaccacgtcatc
ctgatagtcagcgacgaccacgagggtcgtgctgcacagaagaagctggagaccctcctg
gaggagaaagagtccaagagtaaaaaaaggaactatgaaaacctcgaccaactttcctat
gacaacaagcgaggacccaaggctgagaaagtgcttcagtttgaccctgggaccaaaaat
gtgaccgcgctgctgctggaggcgaaggagctggaggccagggtcatcatcctctctgcc
agcgaggatgacgcggccacggtgtacagatcagcagccatgctcaacatgacgggctcg
ggctacgtgtggctggtgggggagcgggagatctcgggcaatgccctgcgctacgccccg
gacggagtgatcggcctgcagctcatcaacggcaagaacgagtctgcccacatcagtgac
gctgtcgccgtggtggcccaggccgtgcacgacttgttcgagaaggagaacatcacagac
ccaccgcggggctgcgtgggcaacaccaacatctggaagacaggacccctgtttaagagg
gtgttgatgtcctccaagtactcagagggtgtcaccggccgggtggagttcaacgaggat
ggggacaggaaatttgccaactacagcatcatgaacctgcagaaccggaaactggtccag
gttgggatttacaacggcagcaatgtcctgaccaacgacaggaagatcatctggccaggc
ggggaaactgagaaacctcaaggctatcagatgtcaaccaagctgaagattgtgaccatc
caccaagagccctttgtgtatgtgaagcccactcaggcagatgggacatgtagggaggaa
ttcaccatcaatggagatcctgtcaaaaaggttttctgcactggacccaatgagaccatc
ccaggccgtcccaccgtggccctgtgctgctacggcttctgcatcgacctgctcatccgc
ctggcaggcgtgatgaacttcacctacgaggttcacctggtggctgatggtaaatttggt
acccaagagagggtgaacaacagcaacaagaaggagtggaacgggatgatgggggagctg
ctgagtggccaggctgacatgattgtggctcccctcaccatcaacaacgagcgggctcag
tacattgagttctccaagcccttcaagtaccagggcctcaccatcctcgtgaagaaggaa
atcccccgcagcaccctggactcgttcatgcagcccttccagagcacgctctggctgctg
gtggggttgtctgtgcacgtggtggcagtgatgttgtacctcttagaccgattcagccca
tttggccggttcaaagtaaacagtgaggaggaggaggaagatgcactgccctcgtggtgc
tgctctgatctctcctctccccctgcaggtgctccccggagtttctctgcccgtatcctt
ggcatggtgtgggctggctttgctatgatcattgtggcttcatacactgccaacctggca
gccttcctggtgttggaccgacctgaggagaggatcacaggcattaacgacccccggctg
cggaacccctcggataagttcatctacgccacggtgaagcagagctctgtggacatctac
ttccgacggcaggtggagctgagcaccatgtaccggcacatggagaagcacaactacgag
agcgctgccgaggccatccaggcagtgagggacaacaagctccacgccttcatctgggac
tcggcggtgctggagttcgaggcctcccagaagtgtgacctggtgaccacgggggagctc
ttcttccgctccggcttcgggatcggcatgcgcaaggacagcccctggaagcagaacgtc
tccctggccatcctcaagtctcacgagaacggcttcatggaggatttggacaagacttgg
gtgaggtatcaagagtgtgattcccgtagcaatgccccagcaacactcacctttgaaaat
atggcaggtgtgtttatgctggtggctggaggtattgttgccgggatatttttaatattc
atagagatagcttacaaaaggcataaggacgcgcggaggaagcagatgcagctggcgttt
gcggccgttaatgtgtggaggaaaaacctgcaggatagaaaaagtggtagagcagaacct
gaccctaaaaagaaagccacttttaggtccatcacctccaccctggcctccagcttcaag
agacgtaggtcctccaaggatacgccctgcagaatggtccctcaggagtgccagagagac
aggctggcaccatggagccaagacagccctgggaagcttccaccccactctgaacgtcct
agcgcccaccatcacccgagctgcacagcctctccgcggcacatcatccccaccgcccca
ggaggagatgcatgtgttccccataggcagctcctgcaactcgagtag
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