Geospiza fortis (medium ground-finch): 102042638
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Entry
102042638 CDS
T03755
Symbol
SLC6A4
Name
(RefSeq) solute carrier family 6 member 4
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gfr02000
]
102042638 (SLC6A4)
Transporters [BR:
gfr02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
102042638 (SLC6A4)
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Paralog
GFIT
Motif
Pfam:
SNF
5HT_transport_N
PRONE
Motif
Other DBs
NCBI-GeneID:
102042638
NCBI-ProteinID:
XP_005424488
UniProt:
A0A6I9HMZ9
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All DBs
Position
Un
AA seq
668 aa
AA seq
DB search
MEKKTTSNEKEPLTSKKDASDCSKGEDCKENGLVVRNPKSALRLVEDGNKAHPSQGDKGE
AAQISNGYSGVQSSAPCNGEVEDAQGTAPAATTTTTTTTSTTCGAEAQQQLMELEDRETW
SKKIDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPYTIMALFGGIPLFYMELALGQY
HRNGCISIWRKICPIFKGIGFAICIIDLYVASYYNTIMAWAFYYLISSFTAELPWTSCTN
PWNTGNCTNYFSKDNVSWSLHSISPAEEFYTRQVLQVHRSNGLDDLGGISWQLTLCLLLI
FTIVYFSIWKGVKTSGKVVWVTATFPYIILFILLVRGATLPGAWRGVLYYLKPDWQKLLA
TEVWVDAAAQIFFSLGPGFGVLLAYSSYNKFHNNCYQDALVTSTVNCLTSFVSGFVIFTV
LGYMAEMRNEDVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLLTLGLDSTFAG
LEGVITGVLDEFPHVWGKRRELFVLGLTILCFLGSLATLTFGGAYVVKLFEEYATGPAVL
TVVFLEAVAVSWFYGITQFCNDVKEMLGSAPGWYWRVCWVAISPLFLLFVTCSFLSSPPE
LRLFDYDYPYWTTVVGYCIGTSSIIFIPIYMIYRLVITPGTLKERILKSITPETATEIPF
GDIRMNAV
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaagaccacaagcaatgagaaagagcccctgacttccaagaaagacgcctca
gactgtagcaaaggagaagattgtaaagagaacggacttgtggtcaggaaccctaaatct
gccctgcggctggtggaggatggcaacaaagcccacccgagccagggggacaaaggggag
gcagctcagatctccaatggttattcaggggttcagagctcagctccctgcaatggagag
gtggaggatgcccagggcacggccccagcagccaccaccaccaccaccaccaccacgtcc
accacctgtggggctgaggctcagcagcagctgatggagctggaggacagggagacctgg
agtaaaaaaattgactttctcctctctgtcattggatatgcagtggatctgggaaatgtg
tggagatttccttatatctgctatcagaatggaggaggagcattcctcattccttacaca
atcatggccctctttggagggattcctctcttctacatggaattagcactaggacagtac
cacaggaatggctgtatttccatctggagaaaaatatgtcctatattcaaaggaattggc
tttgccatctgtatcatagatctttacgtagcctcctactacaacaccatcatggcttgg
gctttttactacctcatctcctccttcacggcggagctgccctggaccagctgcacaaac
ccctggaacacaggaaactgcaccaactacttcagcaaggacaatgtcagctggtccctg
cactccatctctcctgcagaagaattttatacccgccaggttctgcaggtgcacaggtcc
aatgggctggatgacctggggggcattagctggcagctgaccctctgcttgctgctcatc
ttcaccattgtgtacttcagcatctggaaaggggtcaaaacatctggcaaggtggtttgg
gtgactgccacgttcccttacatcatcctcttcatcctgctcgtgagaggtgcaactctg
cctggggcttggagaggtgtcctctactacctgaaacctgactggcagaaactcctggcc
actgaggtttgggtggatgcagcagctcagatttttttctccctgggaccaggctttgga
gtcctgctagcttattccagctacaacaaattccacaacaactgctaccaagacgctctg
gtcaccagcaccgtgaactgcctgaccagcttcgtgtctgggtttgtcatcttcaccgtg
ctggggtacatggctgagatgaggaatgaagatgtctcagaggttgccaaagacactgga
cccagcctgctcttcatcacctacgcagaggccattgcaaacatgccagcttccaccttc
tttgccatcatcttcttcctcatgctgctcacgctgggcttggacagcacgtttgcagga
ctagagggagtgattactggagtcctggatgaattcccacatgtctggggcaaacgcagg
gaattgtttgtccttggtctgaccatcctttgctttttggggtcactggcaaccctgaca
tttggaggagcatatgtggtgaagctgtttgaggaatatgccacgggtccagctgtcctg
accgtcgtgttcctggaggcagtggctgtgtcctggttctatggcatcacccagttttgc
aacgatgtgaaagaaatgctgggctctgccccaggctggtattggcgagtttgctgggtt
gcaattagtccacttttccttctgttcgtcacttgcagctttctgtccagccctcctgag
ctgaggctttttgattatgattatccctactggaccacagttgtggggtactgcatagga
acctcctccatcatcttcattcccatctacatgatctatcgcttggtcatcaccccaggg
acactcaaggagcgtattctgaaaagcattactccagaaacagccacagaaattcccttt
ggagacatccgcatgaatgcagtataa
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