Geospiza fortis (medium ground-finch): 102044518
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Entry
102044518 CDS
T03755
Symbol
POLR1B
Name
(RefSeq) RNA polymerase I subunit B
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102044518 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gfr03021
]
102044518 (POLR1B)
Enzymes [BR:
gfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102044518 (POLR1B)
Transcription machinery [BR:
gfr03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
102044518 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
zf-piccolo
Motif
Other DBs
NCBI-GeneID:
102044518
NCBI-ProteinID:
XP_014163172
UniProt:
A0A6I9Z945
LinkDB
All DBs
Position
Un
AA seq
1010 aa
AA seq
DB search
MPQGTIKQPLGYIPIMVKSKLCNLCGFSPQDLLQHHEEEEEMGGYFIINGLEKVIRMLIM
PRRNFPLAMARHKWKNRGPGFTEYGVVMHCVKDEHTAINMNLHYLENGCVMLNFIFRKEL
FFLPLGFALKALVNFPDYQIFEELVKGREDDTFYANCVTEMLRAVVDAGCLTQQNVLDYL
GKSFRVKLNLPEWYSNEQAADFILSNCICIHLTNRTEKFYLLCMMTQKLYAFAKGECMED
NPDSLMNHEVLTPGQLFLMFLKERLETWLQSVRFVLEKRAEKADISLNTDSLVKAFTLAP
DFTKPFEYLLATGNLRSKTGLGMLQASGLCVVGDKLNFIRYLSHFRCIHRGAAFSQMRTT
TVRKLLPESWGFLCPVDTPDGEPCGLMNHMTALCEIVTEMVPVTDIPPLLCSLGVTPIDA
APSQPYSECYRVVLDGSMVGWVEQELAPEIAQTLRRFKITQEKRFPARAEVVLIPMTGKP
SLYPGLFIFTNPCRMVRPVRNLSYGKNEWIGTLEQIFMNVATLESEVVPGVTTHQELFPH
SILSVVANLIPFSDHNQSPRNMYQCQMGKQTMGFPVYNYKDRSDNKLYHLHTPQSPLVRP
SMYDYYGMDSYPVGTNSIVAVISYSGYDMEDAMIVNKSSWQRGFAYGSVIKAESIDLSLK
ASRAGDNLVFGIRPGDPNIGEKLDADGLPFVGSILQPGDPFYSFMNLNTGETFTVYYPSK
EVGIVDNVRLCSNDRGTGKFKKACITVRVPRNPTIGDKFASRHGQKGILSQLWPVEDMPF
TENGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGVSYDATPFTFTEKKSALKYFGE
TLASAGYNFFGTEKMYSGISGVELEAEIFVGVVYYQRLRHMVSDKFQVRTTGPRDAVTNQ
PVKGRNVEGGIRFGEMERDALLAHGTSFLLQDRLFNCSDGSVAYVCTSCGSMTSPVLEKL
SQASVTSSRRYSCSVCSEVDAIEVVPVPHVFRYFVAELAAMNIKTKLNVE
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgccacaagggactatcaaacagcccttagggtatattccaatcatggtcaagtccaaa
ttgtgcaacctctgtgggttttctccacaagaccttctgcagcaccatgaggaggaagag
gaaatgggaggctactttataatcaatggcttagaaaaagtaatcaggatgctgattatg
cccaggcgaaacttccccctcgcaatggcaagacacaagtggaaaaacagaggccctggt
ttcacagagtacggggtggtgatgcactgtgtcaaggatgagcatactgcaataaatatg
aaccttcactacttggaaaatggctgtgtcatgttgaatttcatttttcgcaaagagttg
ttcttcctccccttggggtttgctctgaaggcattggttaatttcccagactaccagatt
tttgaagagttggtgaaaggaagggaagatgacaccttttatgccaactgtgtcactgag
atgttgagagcagtggtggatgctggctgtttgacacagcaaaacgtcctggactacctg
ggaaagagcttcagagtgaaactcaacctgcctgagtggtacagcaatgaacaagctgca
gatttcattctgagcaattgtatctgtattcacctgaccaatagaactgaaaagttctac
ctgctctgtatgatgacccagaaactctatgcttttgccaaaggggaatgcatggaagat
aacccagacagtcttatgaatcacgaggtgcttaccccaggacagcttttccttatgttc
ttaaaggagaggcttgaaacctggctgcaatctgttaggtttgttttggagaaaagagca
gaaaaggcagatatcagcctaaatacagacagcctggtgaaggcattcaccctggcacca
gacttcaccaagccatttgagtatctccttgcaactggtaacctgaggtctaaaacaggg
ctgggcatgctgcaggccagtggtctctgtgtggtgggggacaagctgaatttcatccgc
tacctctcccacttccgctgcatccacagaggggcggcgttctcccagatgagaaccacg
actgtgcgcaagctgctgcccgaatcctggggcttcctgtgccctgtggacaccccagat
ggagagccctgtgggctgatgaaccacatgacagctctgtgtgaaattgtcactgagatg
gtgcctgtgacagacatcccacctttgttatgttccctgggtgtcacccccattgatgca
gctccaagccagccttactcagagtgctacagggttgtgctggatggctccatggtgggc
tgggtggagcaggagctggctcccgagattgcacaaactctccgccgtttcaagataaca
caagagaagagatttcctgcacgggcagaagtggtccttatcccaatgacaggaaaaccc
agcctgtatcctgggctcttcattttcaccaacccttgcaggatggtgcggcctgtcaga
aacctgtcctatggaaagaatgaatggattgggactctggaacagatcttcatgaacgtg
gccacactggagtcagaggtggtgcctggagtgaccactcaccaggaactcttccctcac
agcattttgagtgtggtggccaatctcattcccttctcagaccacaaccaaagtccacgg
aacatgtaccagtgccagatgggaaagcagaccatggggtttcctgtttacaactacaag
gatcgctcagataacaagctgtaccacctgcacaccccccagagccctctggtgaggccc
agcatgtatgactattatgggatggacagctatcccgttggcaccaattccattgtggct
gtcatctcctatagtggctatgacatggaagatgcaatgatcgtaaataaatcttcctgg
cagagaggatttgcttatggaagtgttatcaaggcagagagcattgacctttcccttaaa
gccagcagggcgggagataatttagtatttggcatcaggcctggcgatccaaacattggg
gagaagctggatgctgatggactgccttttgtggggtctatcctgcagcctggggacccc
ttctacagcttcatgaacctcaacacaggggagaccttcactgtgtactatccgagtaag
gaagtgggcattgtggacaacgttaggttgtgcagcaacgaccgtggcactgggaagttc
aagaaggcttgcatcactgtgagggttccccgaaatcccactattggggacaaatttgcc
agccgtcacggacagaaaggcatcctgagccagctgtggcctgtcgaggacatgcccttc
acagagaacggcatggttccagacatcctcttcaaccctcacggctttccctcccgcatg
accattgggatgttaattgagagcatggcagggaagtcagcagccctgcacggggtgtcc
tacgatgccactcccttcaccttcaccgagaagaaatctgctctgaaatacttcggtgag
actttggccagcgcgggttacaacttctttggcacggagaagatgtacagcggcatcagc
ggggtggagctcgaggcagagatcttcgtgggggtggtgtactaccagcgcctgcgccac
atggtctccgacaagttccaggtgaggaccacggggccccgagacgctgtcaccaaccag
cccgtcaagggcaggaacgtggaaggtgggatccgcttcggcgagatggagcgggacgct
ctgctggcccacggcacgtccttcctgctgcaggaccgcctcttcaactgctctgacggc
tccgtggcctacgtgtgcacgagctgcggcagcatgacgtcccctgtgctggagaaactg
tcccaggcctccgtgaccagcagcaggaggtactcctgctccgtctgcagcgaggtggat
gccatcgaggttgtccctgtgccccatgtcttccgctacttcgtggctgagctggcggcc
atgaacataaaaacaaagctcaatgtggagtag
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integrated database retrieval system