Glossina fuscipes (tsetse fly): 119639164
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Entry
119639164 CDS
T09630
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
gfs
Glossina fuscipes (tsetse fly)
Pathway
gfs03020
RNA polymerase
gfs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gfs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119639164
09124 Replication and repair
03420 Nucleotide excision repair
119639164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gfs03021
]
119639164
03400 DNA repair and recombination proteins [BR:
gfs03400
]
119639164
Enzymes [BR:
gfs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119639164
Transcription machinery [BR:
gfs03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
119639164
DNA repair and recombination proteins [BR:
gfs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
119639164
BRITE hierarchy
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF3137
Motif
Other DBs
NCBI-GeneID:
119639164
NCBI-ProteinID:
XP_037892346
UniProt:
A0A9C5Z5E0
LinkDB
All DBs
Position
Unknown
AA seq
1881 aa
AA seq
DB search
MASSDSKAPLRQVKRVQFGILSPDEIRRMSVTEGGVQFAETMEGGRPKLGGLMDPRQGAI
DRSSRCQTCAGNMTECPGHFGHIDLAKPVFHIGFITKTIKILRCVCFYCSKMLVSPHNPK
IKEIVMKTKGQPRKRLAYVYDLCKGKTICEGGEDMDMTKDGQTIDPNKKPGHGGCGHYQP
SIRRTGLELTAEWKHVNEDSQEKKIQVTAERVWEILKHITDEECFIMGMDPKYARPDWMI
VTVLPVPPLAVRPAVVMFGSAKNQDDLTHKLSDIIKGNNELRKNEASGAAAHVIQENIKM
LQFHVATLVDNDMPGMPRAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVITP
DPNLRIDQVGVPRSIAQNLTFPELVTPFNIDRMQELVRRGNSQYPGAKFIVRDNGERIDL
RFHPKPSDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCT
SPYNADFDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKMT
KRDVFITREQMMNLLMFLPTWDGKMPQPCILKPRPLWTGKQLFSLIIPGNVNMIRTHSTH
PDDEDDGPYKWISPGDTKVMVEHGELIMGILCKKTLGTSAGSLLHICFLELGHEIAGRFY
GNIQTVINNWLLLEGHSIGIGDTIADPQTYNEIQLAIKKAKDDVINVIQKAHNMELEPTP
GNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACVG
QQNVEGKRIPYGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEYYFHAMGGREGLID
TAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSVGQLIQLRYGEDGLAGETVEFQNLPTV
KLSNKAFEKRFKFDWSNERYMRKVFTDDVIKELSESGTAFPQLEVEWDELCRDRDSLREI
FPNGDSKVVLPCNLQRMIWNVQKIFHINKRIPTDLSPLRVINGIRELLRRCVIVVGNDRL
SKQANKNATLLFQCLIRSTLCTKYVAEEFRLSTEAFEWLIGEIETRFQQAQVNPGEMVGA
LAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGGAAR
DAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQRTVISEDQEFVNVYYEMPDFDPTRISP
WLLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNADKLVLRIRIMNNEENKF
QDEEEAVDKMEDDMFLRCIEANMLSDMTLQGIEAIGKVYMHLPQTDSKKRIVITETGEFK
AIGEWLLETDGTSMMKVLSERDVDPVRTSSNDICEIFQVLGIEAVRKSVEKEMNAVLQFY
GLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLMDASAHAETD
PMRGVSENIIMGQLPRMGTGCFDLLLDAEKCRYGIEIPSTLGSSMLGGSAMFFGAGATPS
MSPPMTPWVNCGTPRYCSPSGHLLGMTPGPSFSPSAASDASGLSPSWSPAHPGSSPSSPG
PSTSPYYPSSPSASPSYSPNSPNYTTSSPGGASPNYSPLSPHYSPTSPVYAASPRTTTPG
FNPQATGYSPSTSYSPSSPVYSPTSNYPTSSPSFSGSGTNLYSPTSAYSPTSSNFSPNSP
SYSPSSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPTYTPVTPSYSPTSPNFSASPQYSPA
SPAYSQSGAKYSPTSPKYSPPSPSYDGSPGSPQYTPASPQYSPASPKYSPTSPLYSPTSP
QHSPANQYSPTGSSYSASSPRYSPNMSSYSPSTKYSPTSPSYTPTRNYSPTSPIYSPTSH
GYSPTSPAYSPSSPAYEESDE
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atggcttctagcgactctaaagccccgctgcgacaagtaaagcgtgtgcagtttggcatt
ttgtcacctgatgaaattcgccgtatgtctgtgacagaaggcggggtacaattcgccgaa
accatggaaggtggccggcctaaattgggagggttaatggacccccgtcagggtgcaatt
gaccgttcttctcgttgtcaaacgtgtgctggaaatatgaccgaatgtccagggcatttt
ggccacatcgacttagctaaacctgtttttcatattggtttcatcacaaaaaccattaaa
atcttacgttgcgtttgtttttattgttctaaaatgttggtttcgccacacaatccaaaa
attaaggaaatagttatgaagacgaaaggacaaccgcgcaaacgtttagcgtatgtgtac
gatttatgcaaaggtaagaccatttgcgaaggtggcgaggacatggatatgaccaaagac
ggacaaaccattgatcccaataaaaaacccggccacggaggttgtgggcattatcagcct
tcaatcagaagaactggtttggaattaactgcggaatggaaacatgttaacgaagattct
caggagaaaaaaattcaagttactgctgaaagagtttgggaaatcttaaaacacatcact
gatgaagaatgttttataatgggcatggatccgaaatatgcgcgccccgattggatgatt
gtcaccgttttgccagttccgcccttagctgtacgacccgcagtcgttatgttcggttcc
gccaagaatcaagatgatttaactcataaactctccgatattatcaaaggcaacaatgag
ctgcgcaaaaacgaagcttccggtgctgctgctcacgttatacaggaaaatattaaaatg
ttgcagtttcatgttgctactttagtagacaatgatatgccgggtatgcctagagctatg
cagaaatcaggaaagcctctaaaggccattaaggcacgtttgaagggaaaagaaggccga
atacgaggcaatttgatgggtaaacgagttgatttttctgcgcgtactgttattactccc
gacccaaacctgcgaatcgatcaagtcggtgtacccaggtcaatagcacaaaatcttact
ttccctgaattagtcacaccttttaatatcgatcgcatgcaagagctggtaaggcgtggc
aattcccaatatccaggagcaaagtttatagtacgtgacaatggtgaacgtatcgatttg
cgtttccacccaaaaccctctgacttacatttgcaatgtggctataaggtggaaagacat
ttgcgggatgatgatttggttatattcaatcgtcaacctacactgcacaaaatgagtatg
atgggtcatcgtgttaaagtgttgccatggtctacattccgtatgaatttatcttgtact
tccccatataacgcagattttgatggcgatgaaatgaatttacatgtaccgcaatctatg
gagactagagctgaagtcgaaaatatacacataacacctcgtcagattataacaccacag
gctaataaacccgtcatgggtattgtacaagataccttaacggcggtacgaaaaatgaca
aagcgtgacgtttttataacgcgtgagcaaatgatgaatttattaatgtttttgcccact
tgggacggtaaaatgcctcagccttgcattctaaagccgcgccctctttggactggtaaa
caattgttttctttgattattcctgggaatgttaacatgatacgcacccactcaactcat
cctgacgatgaagacgatggcccttataagtggatttctcctggtgatactaaggtaatg
gtcgagcatggcgaactaattatgggcattttatgtaaaaagaccttgggtacgtcggct
ggttcattgttacatatttgctttctggaattgggtcatgaaatagctggccgtttttat
ggcaacattcagactgtgatcaacaactggctattattggagggccatagtattggtatt
ggtgatacaattgctgatccgcagacttacaacgaaattcagctcgccattaagaaagct
aaagatgatgtgattaacgtcattcaaaaggctcacaatatggaattagaaccgacgccg
ggtaatacattacgtcaaacttttgaaaatcaagtaaatcgtattttgaacgatgctcgt
gacaaaactggtggctcagccaagaaatctctgacggaatataataacctaaaggccatg
gtggtatctggatccaaaggctccaatattaatatctcacaggttattgcttgtgtggga
caacagaatgttgaaggcaaacgtataccttatggttttcgtaaacgaactttgccacat
ttcatcaaagatgattacggccctgaatccagaggtttcgtggaaaactcctatctagcc
ggcttgactccttctgagtattattttcacgccatgggcggtcgcgaaggtcttatcgat
accgctgtcaagacagccgaaaccggctatatacagcgtcgtctaataaaggctatggaa
tctgtaatggttaactatgatggtacagttcgtaattccgttggtcaattaattcaattg
cgttatggagaagacggtttggccggtgagactgtagaatttcaaaatctgcccactgtt
aaattgtcgaataaagcatttgagaaacgttttaaattcgactggtcaaacgagcgttac
atgcgcaaagtatttaccgatgacgtcatcaaagagcttagtgagagcgggactgcgttc
ccgcaactagaagtagaatgggatgagctgtgtcgtgatcgtgattctttacgtgaaata
ttccccaatggtgactcgaaggttgttttgccctgtaacttgcagcgaatgatttggaat
gttcagaaaatttttcacattaataaacgtattccgactgacttgtcacctttacgagtc
attaatggcatacgcgaactattacgtcgttgtgtaatcgtagtcggaaacgatcgccta
tcaaagcaggcgaataaaaatgccactttactgtttcagtgtttgatacgttcgaccctt
tgtacaaaatatgttgctgaggaattccgtctatctactgaagctttcgaatggttgatt
ggtgaaatcgaaactagatttcaacaggctcaagtcaatccgggcgaaatggtaggcgcc
ttggcagcccaaagtttgggagaaccggccacacaaatgacactgaataccttccatttt
gctggagtctcttcgaaaaatgttactttaggagtgccacgtcttaaagaaattattaat
atatccaagaaaccgaaagcgccctcgcttacagttttcctgacaggtggtgctgccaga
gatgctgaaaaagctaaaaatgtgttatgtagattggaacataccaccttacggaaagtt
acagccaatacagccatatattatgaccctgatcctcagcgcactgtgatttcggaagat
caagaattcgtcaatgtttattacgaaatgcccgatttcgacccaactcgcatttcgcca
tggctattacgtattgaattggatcggaaacgtatgacggacaaaaaattaaccatggag
caaatagctgagaaaattaatgctggtttcggtgatgatctgaattgcatattcaatgat
gacaacgctgacaaattagtgctgcggatacgtatcatgaacaacgaggagaacaaattc
caagatgaggaagaagcagttgacaaaatggaggacgacatgttcttacgttgcatagaa
gctaatatgttgtctgatatgactttgcaaggtattgaggctataggcaaagtttatatg
cacttgcctcagaccgacagtaagaaacgtatcgttattactgaaacgggtgaatttaaa
gctatcggagaatggcttctagaaactgatggtacctctatgatgaaagtgctatcagaa
agagatgtagatcctgtacgtacttcttccaacgatatttgtgaaatatttcaagtgctg
ggcatagaagctgtccgtaaatcagttgaaaaggaaatgaatgccgtattgcaattttat
ggcctctacgtgaattatcgccatttggcgttgttatgtgacgttatgacagctaaaggt
catttgatggccattacacgtcatggtattaatagacaagatactggtgctttgatgcgt
tgctcatttgaagaaactgttgacgtattaatggatgcttcagcgcatgctgaaactgat
ccaatgagaggtgtgtcggagaatattattatgggtcaattgccacgtatgggcacgggt
tgcttcgatttattactggatgctgaaaagtgtcgttatggtattgagatacccagcaca
ttgggcagtagtatgttgggcggttccgccatgttttttggagctggtgctacgcctagc
atgtcaccgcctatgactccgtgggtgaattgcggtacacctagatattgctctccttcc
ggacatttgttgggcatgaccccgggtcccagcttttcgccttcagcggcttcagatgct
tcaggtttatcacccagttggtctcctgctcatcccggttcttcgcctagctcgcctggg
ccttcaacctcgccgtactacccatcttcgcctagtgcctctccgtcttattcgccaaat
agtccgaattatacgacttcttccccgggtggtgcttcaccgaactattcacccctcagt
ccgcattactcaccaaccagtccggtctacgcagctagcccgcgaactacaacgcccggt
ttcaatcctcaagccaccggttattcgccttcaactagttattcaccctcttcacctgtc
tattcacctacttcaaattatccgacttcaagcccttcgttttccggtagtggcacaaat
ctatattcccccactagtgcttattcgcctacttcctctaatttttcacctaattctcct
tcttattcaccatcttcaccttcttattcaccgactagcccgtcatattcgcctacttca
ccggcgtactctcctacatcgccatcttattcccctacttcacctacttacactccggta
acaccttcttattcgcctacgtctcccaatttttccgcatcgcctcaatattcccccgcc
tcgcctgcttattcccaatctggtgctaaatactcaccgacatcacctaagtactcaccg
ccttcaccatcatatgacgggtccccaggctcaccgcaatatacaccagcgtctccacaa
tattctccagcttctccgaagtattctcccacttcacctctatactcacccacttcgccg
cagcattcgccagccaatcaatacagtcctactggctccagctattcggcaagttcacca
cgttattcacccaatatgtccagctattcacctagtactaaatattccccaacatctccg
agttataccccaacccggaactattcacccacctctcctatatactcgccaacatctcat
ggttattcacctaccagtccagcttattcacccagcagccctgcttacgaagaaagcgat
gagtaa
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integrated database retrieval system
