Gallus gallus (chicken): 416526
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Entry
416526 CDS
T01006
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
gga
Gallus gallus (chicken)
Pathway
gga04010
MAPK signaling pathway
gga04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
416526 (CACNA1H)
04020 Calcium signaling pathway
416526 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gga04040
]
416526 (CACNA1H)
Ion channels [BR:
gga04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
416526 (CACNA1H)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
416526
NCBI-ProteinID:
XP_015149908
CGNC:
3883
LinkDB
All DBs
Position
14:complement(5635774..5837428)
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AA seq
2461 aa
AA seq
DB search
MSDGESREPRPAGGEVRVPITVPPRRAAEQPLDDAGSAPSGSPSRDPPPDLASEEEEQVP
YPALAPTAFFCLKQTTRPRSWCLRLVCNPWFEHVSMLVILLNCVTLGMFQPCEDVECQSE
RCTILEAFDDFIFAFFAVEMVIKMVALGIFGQKCYLGDTWNRLDFFIVMAGMMEYSLDGH
NVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQL
WAGLLRNRCFLDRNLATTYNLTFLHPYYRTDEAEENPFICSSHRENGMQKCSNIPTRKEY
KVECTLSMDSYTPSLYNPDFSSKNACINWNQYYNVCMAGDVNPHNGAINFDNIGYAWIAI
FQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRENQ
LMQEQRARYLSNDSTIASFSEPGSCYEELLKYICHIFRKVKRRTIRLYNNWQSKRRKKVN
PNNTTNGQSRRGKKRITSIHHLIHHHHHHHHHHYHISNGSPRGPRSNPEICDLELKVMKP
GGQLMLPSPSPNLQSPVPPPDSESVHSIYHADCHVEGPQVNCKSSNAPASIKLTTGLSNH
GNMNYPTILPSPTSKASSVPVPKGKKNGSSPVAVVNSPVTLGTDSYGKLQQLVGEHGLRR
TPSRLSGLSVACPLPSPPGGTLSCELQDCPFCASLLEDPEFAFSESDSCDSDSNGIYEFT
QDLRHGDHRDQLQQQRGRRKRKKKKPKERNKVTRLWKAFGSKLKRIVESKYFNRGIMIAI
LINTLSMGIEYHEQPDELTNALEISNIVFTSMFALEMLLKLLAFGLFGYIKNPYNIFDGI
IVVISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLM
LFIFIFSILGMHLFGCKFSLKTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNG
MASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDTDEDKTSANFDDDFE
KLKDLRATEMKMYSLAVTPNGHLEGRGSMPPPIIMRTAATPMPTPKCSPHMDSVHTFVDS
RRGSNASLDPLTYDQKSSSSLRSSPCANWGTNSNWGSRRSSWNSLGRAPSLKKKNQSGER
ESLLSGEGKGSTDDDSDDAKSSTVSRPSLHRRAESLDYRSSLDLPELLQLPPMRHSLSIS
PMAVLPAEYQDCNGKMVHVPSEFFLHIDGHKEEAVDYEDDMEDSYCYRIRKVLEPYKPEW
CKSHEDWSLYLFSPQNRFRVMCQKVIAHKMFDHVVLVFIFLNCITIALERPDIDPHSTER
IFLSVSNYIFTAIFVAEMMVKVVALGFFSGENTYLQSSWNVLDGVLVFVSIIDIIVSMAS
AGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAFFIIFG
ILGVQLFKGKFYYCDGPDVKNITTKTDCTNAHYRWVRRKYNFDNLGQALMSLFVLSSKDG
WVNIMYDGLDAVGIDQQPIQNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQ
EAEEARRREEKRLRRLEKKRRSKEMYLSEAQRRPYYADYSPARKYIHTLCTSHYLDLFIT
FIIGVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAVLKLVAFGFRRFFKDRWNQL
DLAIVLLSIVGITLEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQ
ALPQVGNLGLLFMLLFFIYAALGVELFGKLDCSEENPCEGLSRHATFTNFGMAFLTLFRV
STGDNWNGIMKDTLRECTREDKHCLSYLPVISPVYFVTFVLIAQFVLVNVVVAVLMKHLE
ESNKEAKEDAEMDAEIELEMSRGASTTSGSRGGAVALESRASCRSQEAMKSEPAAQAKHQ
ALEALSCENVSVAIPDTLEGAETPMMEILSFCSVSHHVLTPSHHPRGREAEGGTAIPQPQ
DSQNMLTVRKISVSRMHSLPNDSYMFRPVMPAKAPFPLHEVEMEAYPCKSQRGSITSIRS
QPVGTCSSLRVPPESLHVAVRSPGREGWHRWKVLPPHVVPRSPTLSKLLCRQEAVRTDSV
DGHPPDPKDNLQAERGEMPPSPKHPQRTLTPSPLHPAASSLPGSPPRSPPTSPHRHPSLT
RKHPCSQRGVPSPTESPPSPQGCLLEPSDLADEEVRHINSSAKDWGEHSEAGSCSTSPFV
SPAASPVPLKNCSTSSLTAGSGKERDLKKFYSIDTKGFLTKPSWADDQRRHSIEICPSVR
DGDCGFEERAEEKPRSPAHVQPESEYIHGARRKKKMSPPCISIDPPMEDDSGAASRTKPS
ENSMLRRRTPSCEFPAYREPLEPAEAQPGEPGCKAERRAQHLAIPGFSFEQSDGGGSLSS
LSDLLDSGRSTPDCELRKPEPLKTQRSNAEKSKELLSVAKSPVRMQDLVTVATEEDIDEP
V
NT seq
7386 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatggcgagagccgagagccgcgcccggccggcggcgaggtgcgggtgcccatc
actgtgccgccccgccgcgccgccgagcagcccctggacgatgccggctccgctcccagc
ggttctcccagccgcgacccgccgcccgacctggcctccgaggaggaggagcaggtgcct
tacccggcgctggcacccaccgctttcttctgcctcaagcaaaccacccgcccgcgcagc
tggtgcctcaggctggtctgtaacccctggttcgagcatgtcagcatgctggtcatcctc
ctgaactgtgtcaccctgggcatgttccagccctgcgaggacgtggagtgccagtcggag
cgctgcaccatcctggaggcatttgacgacttcattttcgctttctttgcggtggagatg
gtcatcaagatggtggctctggggatcttcgggcagaagtgttaccttggagacacgtgg
aatcgcctggacttcttcatcgtgatggcaggcatgatggagtactccctggatggacac
aacgtcagtctgtctgccatccgcaccgtgcgcgtgctgcggccgctgcgagccattaac
agggtgccaagtatgcgaatactcgtcaccctgctgttagatactctgcctatgttaggc
aacgtcctcctcttgtgcttctttgttttcttcatctttgggatcgtcggtgtgcagctc
tgggcagggctgctgagaaacaggtgtttcctggacaggaatttggcaacgacgtataac
cttaccttcctgcatccgtactaccgcacagacgaagcagaggagaatccatttatctgc
tcatcccatcgtgagaacggcatgcagaaatgctccaacatcccaaccaggaaggagtac
aaggtggagtgcaccttgagcatggactcctacaccccaagtttatacaaccctgacttc
agcagcaagaatgcctgcataaactggaaccagtattacaacgtatgcatggcaggggat
gtaaacccacacaatggagctattaattttgataatattggctatgcctggatagctata
tttcaggttataaccctggaaggatgggttgacatcatgtattatgtgatggatgcacat
tctttttacaattttatatattttatattgcttataatagttggttccttcttcatgatt
aacttgtgcctggttgtgatagcaacacagttttctgaaacaaagcagcgggagaaccag
ctgatgcaggagcagcgggcccgttatctctccaatgacagcacaattgccagcttctcc
gagccaggtagctgctacgaggagctgctgaagtacatctgccacatcttcaggaaggtg
aagcggcggacaatacggctgtacaataactggcagagcaagcgcaggaaaaaagttaac
ccgaacaacaccacaaacgggcagagccgccgaggcaaaaagcgcatcacctccattcac
cacctcatccaccaccaccaccaccaccatcaccaccactaccacatcagcaatgggagc
ccgcgggggccgcgctccaacccagagatctgtgacctggagctcaaggtgatgaagcct
ggcggccagctgatgctcccttctccatcacccaacttgcagagccccgtccctcctcca
gattcggagtctgtgcatagcatttaccatgcggactgtcacgttgaaggaccacaagtg
aactgtaagtcttccaatgcccctgcaagcattaaactcactactgggctctccaaccat
ggcaacatgaattatcctaccatcctgccttcaccaactagcaaagccagttctgtccca
gttcccaaaggaaagaagaatggcagttcacctgtggctgtagttaacagccctgtaact
ttgggcacggattcttatgggaagctgcagcaactggtaggagagcatggtctgcggagg
acacccagccggctgtcggggctgagcgtggcctgcccactgcccagcccgccgggcggc
acgctgagctgcgagctgcaggactgccccttctgcgccagcctcctggaggaccccgag
ttcgccttcagtgagtctgacagctgcgactccgacagcaacggcatctacgagttcacc
caggacctgaggcacggcgaccacagggaccagctgcagcagcagcggggcaggaggaag
aggaagaagaagaaacccaaggagaggaacaaggtcacccgcctgtggaaggcgttcggc
agcaagctgaagaggatcgtggagagcaagtacttcaaccgagggatcatgatcgccatc
ctcatcaacacgctgagcatgggcatcgagtaccacgaacagccagacgagctgaccaac
gccttggagatcagtaacatcgtcttcacaagcatgttcgccctggagatgctcctgaaa
ctccttgcctttggcctcttcggctacatcaagaacccatacaacatctttgacgggatc
atagttgtcatcagtgtctgggagatcattgggcagtcggacggtgggctttccgtgctc
cgaactttccggctgctccgggtgctgaagttggtgcgcttcatgcccgccctccgtcgc
cagctggtggtcctgatgaagacaatggacaacgttgccaccttctgcatgttgctcatg
ctcttcatctttatcttcagcattctcggcatgcatctttttggatgcaagttcagtctg
aagactgatacaggagacacagttccagataggaagaattttgattccttactctgggcc
attgtgacagtatttcagatcctcactcaagaggactggaatgtggtcctgtacaacggg
atggcatcaacatcttcatgggcagcactctactttgtggccctgatgaccttcggcaat
tatgtgctcttcaaccttctggttgccattctggtggaaggcttccaggcagagggggat
gccaataggtcagacacagacgaggacaagacatccgccaactttgatgatgattttgag
aagctgaaagacctccgtgcaacggagatgaagatgtactcacttgctgtcaccccgaat
gggcacctggagggcaggggcagcatgccaccccctataatcatgcgcaccgctgccact
ccgatgcccacaccgaagtgttccccgcacatggattcagtgcacacctttgtggactcg
aggagagggagtaatgcttctctagatcccctgacctacgatcagaagtcctcgtctagc
ctccgcagttccccttgtgccaactggggtaccaacagcaactggggaagccgccgctca
agctggaacagcctgggcagagccccgagcctcaagaagaagaaccaatctggtgaaaga
gagtctttgctctccggggaggggaaaggcagcacagacgatgactccgatgacgccaag
tccagcacggtcagcaggccctcactgcaccgccgggcagagtccttggattaccgcagc
tccctagacctgcccgagctgctgcagctgccccccatgcgccattcgctcagtatcagc
cccatggctgttctgcctgctgagtaccaagactgcaacggcaagatggtgcacgtcccc
agcgagttcttcctgcacatcgatggccacaaggaagaggccgtggactatgaggatgac
atggaggatagttactgctaccggattcgtaaagtcctggagccctacaaaccagagtgg
tgcaagagtcacgaggattggtccctctacttgttttccccacagaatcggttcagagtg
atgtgccagaaggtcattgcccacaaaatgtttgatcatgtggtactggtcttcatattt
ctcaactgcattacaatagcactggagcgaccagacatagatccgcacagcaccgagagg
atattcctgagtgtttctaattacatcttcactgcaatctttgtggctgagatgatggtt
aaggtagtggctcttggctttttctctggggagaacacctatctacagagcagctggaac
gtcctggatggagtcctggtcttcgtatctatcatagacattattgtctccatggcatca
gcaggaggagcaaagatcctgggtgtccttcgcgttttgagactgctgcggaccttgaga
cctctccgagtcatcagcagagccccaggtctgaagctggtggtggaaaccttgatctcc
tccttgaggcctattgggaatattgttctcatctgctgtgctttcttcattatctttggg
attttaggggtgcagctttttaaaggcaaattctactactgtgacggtcccgatgtgaaa
aacatcacaacgaagactgactgcaccaatgcacactacagatgggttcggcggaagtac
aattttgacaatttgggacaggccctcatgtccttgtttgtcctttcctccaaagatggc
tgggtgaacatcatgtacgatggtctggatgctgtgggtattgaccaacagcccatccag
aaccataacccttggatgcttctctacttcatctccttcctgctcatcgtcagcttcttc
gtgctcaacatgttcgtgggggtggtggtggagaactttcacaagtgccggcagcaccag
gaggcagaggaggcccggcgtcgggaggagaagcgtctgagacgcctggagaaaaagcgc
aggagtaaggagatgtacctgtctgaagcccagcgcaggccttactatgctgactattct
ccagcacggaaatacattcacaccctctgcaccagccactatctcgacctcttcatcacc
ttcatcattggagtcaacgtcatcactatgtcgatggagcactacaaccagccaaagtcc
ctggatgaagccctgaagtactgtaactacgtgttcaccatagtttttgtgttcgaggca
gtcctgaagttggtggcatttggttttcgaaggttctttaaggacaggtggaatcagctg
gatttggccatcgttctcttatccattgtgggaatcacgctggaggaaattgagatgaac
gctgcactgcccatcaatcccacaataatacgcatcatgcgggtgctgagaatagcaaga
gtgctgaaactgcttaaaatggccaccggaatgcgagccctcctggacacagtggtacaa
gcgcttccccaggtagggaaccttggcctactttttatgctcctgttttttatctatgct
gccctgggagtggaattgtttggcaagctagactgcagcgaagagaatccttgcgaaggg
ctgagccggcacgccacgttcaccaactttgggatggccttcctcaccctcttcagggtg
tccacgggggacaactggaacggtatcatgaaggacactctccgggaatgcacgcgggaa
gacaagcactgcctcagctacctgcctgttatctctcctgtctacttcgtcaccttcgtc
ctcatcgcacagttcgtcctggtcaacgtggtggtggccgtgctgatgaagcacttggag
gagagcaacaaggaggccaaggaggacgctgagatggacgctgagatcgagctggagatg
tcccgaggagcgagcaccaccagtggcagcaggggaggtgcggtggccctggagagcaga
gcatcctgcagaagccaggaggccatgaagtcagagccagcagcgcaggcgaagcaccaa
gccctggaggcgctgagctgtgagaatgtgtctgtagccatcccagacacgctggagggg
gctgagactcccatgatggaaatcctgtccttctgctctgtttcccaccatgtcctgaca
ccttcccaccacccccgaggccgcgaggctgagggaggcacggccatcccgcagcctcag
gactcccagaacatgctgacggtccgcaagatctccgtttcacgcatgcactccttgccc
aacgacagctacatgttccggcccgtgatgccagccaaagctccctttcccctccacgag
gtggagatggaggcatatccctgcaagtcacagcgagggtccatcacctccatccgctcg
cagcccgtggggacgtgctcctccttgagggtcccccccgagtccctccacgtggccgtg
cgctcccccggccgtgagggctggcaccgctggaaggtccttcccccgcacgtcgtccct
cggtctcctactctcagcaagctgctgtgccggcaggaggccgttcggacagactcggtg
gacggacaccctccagaccccaaggacaacctgcaagcagagcgtggagagatgccacca
tcaccaaagcaccctcagcgcaccctcactcccagccctctccaccctgcagcctcctcc
ctgccgggctcccctccgcgctccccaccaacctccccacaccggcacccatcgctgact
cggaaacacccctgcagccagcgcggggtccccagtcccaccgagagccccccaagcccc
cagggctgcctcctggagccctctgacctggctgacgaggaggttcgccacatcaacagc
tcagccaaagactggggggagcactcggaggccgggagctgctccacgtcgccgttcgtc
tcgccggccgcgtcgccggtgcccctgaagaattgcagcacaagcagcctgacggcaggc
agcggcaaggagagggacttgaagaagttttacagcatcgatacgaagggcttcctcacc
aagcccagctgggcggatgaccaaaggcggcactccatcgagatctgcccctccgtccgc
gatggggactgcggcttcgaggagcgcgccgaggaaaagccacgctcccccgcccacgtc
cagccagagtccgagtacatccacggagcccggaggaagaagaagatgagcccgccctgc
atttctatagatcctcccatggaggacgacagcggggcggcctcgcgcaccaaaccctcc
gagaacagcatgctgcgccgcaggaccccgtcctgcgagttcccggcgtaccgagagccc
ctggagccggcggaggcgcagccgggggagccgggctgcaaagcagagcgccgtgcccag
cacctcgccatccccggcttctccttcgagcagtcggatggcggcggctccctgagcagc
ctctcagacctgctggacagtgggcgatccacaccggactgcgaactgagaaagccggag
cccttaaaaactcaacggagcaacgccgagaaaagcaaagagctgctcagcgtggccaag
agccccgtccggatgcaggacttggtgactgttgcaacagaagaagacatcgacgagccc
gtatag
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integrated database retrieval system
