Gallus gallus (chicken): 417642
Help
Entry
417642 CDS
T01006
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein homolog
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
gga
Gallus gallus (chicken)
Pathway
gga03440
Homologous recombination
gga03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
417642 (BRIP1)
03460 Fanconi anemia pathway
417642 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gga03400
]
417642 (BRIP1)
Enzymes [BR:
gga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
417642 (BRIP1)
DNA repair and recombination proteins [BR:
gga03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
417642 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
417642 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
417642
NCBI-ProteinID:
NP_001028230
CGNC:
3928
Ensembl:
ENSGALG00000005279
UniProt:
Q3YK19
LinkDB
All DBs
Position
19:7628836..7679831
Genome browser
AA seq
1252 aa
AA seq
DB search
MSSDVSQYTIGGVKIMFPCKAYPSQLAMMNAIVKGLNNRQHCLLESPTGSGKSLALLCSA
LSWQQSLYEKSLLKSSCEKEDREPAASLPCRCVCHSRSESSEATAGASHGAACSNNYETG
GSVKHGDQLSDTECKENNTLASKLSAKKRASACGNECDDFQVERKRIRPLETEQQVRKRH
CFSKEVQLVDALEVYNQRKNGELIVHSEKSVKNTSPQTLFSSCTECSCSSGKETRKDSGN
TKKKANGDQTFIPKIFFGTRTHKQIAQITRELKRTAYSGVPMTILSSRDYTCIHPVVSSS
NSNRNELCVELLEGKHGKSCLYYHGVHKLSEHYALQSAHNTYQAWDIEDLVSLGKKLRAC
PYFAARELMVGADIVFCPYNYLLDPQIRESMEINLKGQVVILDEAHNIEDSAREAVSYSV
TESQLNAAREELDFMVNNNIRQKDHEQLRAMCCSLTNWLRESSSQLVETGYETSCKVWSG
KEMLNHFHDMGITNISFPILQKHLSAVLEKEEKISMFGKEELVEIPIVSSATQIVLKGLF
MVLLYLFKDNSRFADDYRVALQQTYAWTNDNQPDVSDTSAFFTKTKHKRNLRHKTVVHML
NFWCLNPAVAFSDLNDVRTVVLTSGTLSPMDSFSSELGVKFSIQLEANHVIRNSQVWVGT
IGTGPNGRKLCATFQHTETFEFQDEVGALLLSVCQKVGQGILCFLPSYKLLDKLKDRWIH
TGLWRNLELVKTVIAEPQGGAKSDFDELLKIYYDAIKFKGEKDGALLIAVCRGKVSEGLD
FCDENARAVITIGIPFPNVKDLQVELKRKYNDQHKTTRGLLPGSQWYEIQAYRALNQALG
RCIRHRSDWGALILVDDRFRNNPNKYITGLSKWIRQQVQHHENFGSALESLHAFAERNQK
GIDFSSQCSNEVFHVPLNSKEPSSASQQEATIHLSPDVPVKSEEQSFVPETHLTTTINSI
NPGPSNQPGGQKVDVESCSHNGIQRRKHMDSTPRRPANKTEKKSDRTNSDFMKEHCCFKP
LTSTPLPVATNCVSTASSKQRKNVNSASELIGGVNQCQSSFTLEHKPSIPESHLETTNFS
VKSTEAPVAEEHLDEQKLQIEPCSELPSVGGRPELSVLEISAEDEDESLYFTPELYDDAE
SEEQEMRPLDPDENQIECGKPTVADDLFVISTSKTLSEPKEMINDDGRNTSLHGTMLSDI
SKNSTVNIEKMTNGEEAEQVESQEVDTKKRKISLSRSRNKGVSPFLLDSTST
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgatgtgtctcaatatactattgggggagtgaagattatgttcccttgcaag
gcttacccttcgcagcttgctatgatgaatgctatcgttaagggcttaaataacaggcag
cattgtttgttggagagccccacaggaagtggcaaaagcctggcgttactttgttctgca
ttatcatggcagcagtctctgtacgagaaatcactgctcaaatcatcatgtgaaaaggag
gacagggagccagcagcctcactgccgtgtcgctgtgtgtgtcattcccgatctgagagc
agcgaggcgactgcaggagcaagtcatggtgctgcatgttctaataattatgaaacagga
ggttctgtaaaacatggagaccaactatcagacacagaatgcaaggaaaacaatacccta
gcttcaaaattgtctgccaaaaaaagggcatctgcatgtggaaatgagtgtgatgatttt
caagtagagaggaagaggattcgtcctttagaaacagagcagcaggttagaaaacgtcat
tgcttttcaaaagaggtgcagctggttgatgctttagaagtttataatcagagaaaaaat
ggggagctgattgttcactctgaaaaaagtgtgaaaaacacttctccccaaacacttttc
agctcttgcacggagtgttcctgttcctctggaaaagaaactcgtaaagattctggtaac
acaaagaagaaagcaaatggagatcaaacattcattcccaaaatattttttggaacacga
acacacaaacaaattgcccagattaccagggagttgaagaggacagcgtattctggtgtc
cctatgacaattctctctagccgggattatacctgtattcatccagtggtgtccagtagt
aatagtaacaggaatgaactgtgtgtagaattactggaaggaaagcatggcaagtcctgt
ctttactatcatggtgttcataaactcagtgaacactatgccctacagtctgcacataac
acataccaggcttgggacattgaggatctagtgagcctgggaaagaagcttcgtgcctgt
ccatattttgcagccagagaactcatggtgggggcagatattgtattttgtccttataat
tatctcctagacccacagatacgggagagtatggaaattaacctgaaaggccaggtagtc
attttggatgaagcccataatattgaggacagtgctcgggaggcagtgagctacagtgtt
acagaaagtcaactaaacgctgctcgagaagagctagatttcatggtcaataacaacatc
aggcagaaggatcatgagcaactacgggctatgtgctgctctttgacaaactggctacgg
gaaagctctagtcagctggtagaaacagggtatgaaacctcctgtaaggtttggagtgga
aaagaaatgctcaaccattttcacgacatgggaataaccaatattagttttcccatttta
cagaaacacctttctgctgtcttggaaaaagaagaaaaaatatcaatgtttggtaaagag
gaacttgtcgagatacctattgtgagctctgccactcagattgtgctgaaagggttattc
atggttcttttatatctttttaaagataacagcaggtttgcagatgattacagagttgct
ttgcaacaaacttatgcttggacaaatgataaccaacctgatgtttcagataccagtgct
ttctttacaaagaccaaacataaaaggaatttgcgacataaaactgtagtccacatgctt
aatttttggtgcttgaatcctgctgtggctttttcagacctaaatgatgtcagaacagtt
gttctgacgtctggtacactctctccaatggattcattttcttccgaacttggtgtgaag
ttttctattcagctggaggcaaatcatgttatccggaactcacaggtttgggttggcacc
attggaacaggcccaaatggtcggaagctgtgtgccacgttccagcatacggagaccttt
gagttccaagatgaggtgggagcacttctgctttcagtgtgtcaaaaagttggccaagga
attttgtgctttttgccatcctataagctgttggacaaattgaaagatcgctggatacac
actggcttgtggagaaacctggagcttgttaagacagtcattgcagagcctcaaggagga
gcaaaaagtgacttcgatgaactgctgaaaatatactacgatgcaataaaatttaaagga
gaaaaagatggagcactcctaatagctgtgtgcagaggaaaagttagtgaaggcttggat
ttctgtgatgagaatgcccgagcagttataaccataggcattccgtttccaaatgtgaaa
gaccttcaggttgaattaaagaggaagtacaatgatcagcataaaactacaagaggcctt
ttaccagggagccagtggtatgaaatccaggcttacagggctctgaaccaggccctggga
aggtgtataaggcataggagtgattggggtgcccttatcttagttgatgaccggttccgg
aataaccctaacaagtacataactggattatctaaatggattcgtcaacaagtccagcat
catgaaaattttggtagtgcacttgaatccttacatgcatttgctgaaagaaaccagaaa
ggcattgatttttcgtcacagtgtagcaatgaagttttccatgtacctttaaattcaaaa
gagccgtcatcagcttctcaacaggaggcaactattcacctgtcaccagatgttcctgtt
aaaagtgaggagcaaagtttcgtcccagaaactcatttaactacaaccatcaactcaatt
aatcctggaccatcaaatcagccaggtggccagaaagttgatgtagagagttgttctcac
aatggaatacaaagaagaaaacatatggactccacacccagaaggcctgcaaataaaaca
gagaaaaagagtgatcggactaattctgattttatgaaagagcactgctgctttaaacca
ctgacttcaacacctttgcctgtagccacgaactgtgtgtccacagcaagcagcaaacaa
aggaagaatgtgaacagtgctagtgaacttattggtggtgtaaatcaatgccagtcatca
ttcactttagaacataaaccaagtataccagaatcacatttggaaacaactaatttttca
gtcaaaagtacagaggctccagttgctgaggagcatcttgatgagcaaaagcttcaaatt
gagccctgtagtgagcttccttcagtaggagggagacctgaactttcagtgttagaaata
tctgcagaagatgaggatgagagtctttatttcacaccagagctctatgatgatgcagaa
tctgaggaacaggaaatgagaccactagatccagatgagaatcagattgaatgtggaaaa
cccacagtagctgatgatctttttgtaatcagtacctcaaaaacactaagtgagccaaaa
gaaatgattaatgatgatggcagaaacacaagtttacatggaacaatgctgagtgatatc
agtaagaatagcacagttaatattgaaaagatgactaatggagaagaagcagagcaggta
gaatctcaagaggtggacaccaagaaacggaaaatcagtctttccagatcacgaaacaaa
ggtgtgtcaccttttttactggacagtactagcacatag
DBGET
integrated database retrieval system
