Gallus gallus (chicken): 418866
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Entry
418866 CDS
T01006
Symbol
SETDB2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
gga
Gallus gallus (chicken)
Pathway
gga00310
Lysine degradation
gga01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
418866 (SETDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gga03036
]
418866 (SETDB2)
Enzymes [BR:
gga01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
418866 (SETDB2)
Chromosome and associated proteins [BR:
gga03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
418866 (SETDB2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
418866 (SETDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
zf-HC5HC2H
Pre-SET
MBD
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
418866
NCBI-ProteinID:
XP_417061
CGNC:
12768
Ensembl:
ENSGALG00000017006
LinkDB
All DBs
Position
1:170526801..170564892
Genome browser
AA seq
1281 aa
AA seq
DB search
MEGNRMLRDCPEEKNRITSRKETAEGDLKAFWTQLESRRVDLIFEQVQEVLLLLKEKIKN
GTATNQECWQAWALVNEADLGDLLTLTNVNDVLDGEDIQEPKPKSQRVVTDDSSGNSVEG
SHSKKEKIEKSDSESEEASSEIQRVPLNPRYRIHKCSSACLSNRAVSSYKGENPLKIPIL
FHFQRRHAKADCLSKSLDVHYKAPCGRSLRSFQDVQSYLFETKCDFLFIDHFSFNTYVLL
GRNTVNPEPLVFDLDISNGAESVPISFCNDIDRARLPYFKYRRASWPRGYYLNNLSSTFL
DSCDCTDGCIDRSKCACLQLTARGCRKVSVSPNAKMSRGYSYKRLEGPVPSGIYECSVSC
RCDKMMCQNRVVQHGIQVRLQVFNTEKKGWGVRCLDDIDKGTFVCTYSGRLMSRAEVQEL
GGADQDLKEESAVNDRGQSFFSKKRKLDSSCSDSEIELVLTGKDDILEHQQSAVNENDST
PIHPRNLNTAATRRLGTRIAVVDNHQLKMEVDTLVHSAGSDEDNSSQPQQSSETELTSGT
NKERSSQKQRVEDLVEVGQTEPAEMDSAECRRKSLSLKGVACGRSDVLNDKYVVKPSTKV
LQKADCVEEAHRQAKQGIFCVEADGDRTLLKNANNENIYILDATKEGNVGRFLNHSCCPN
LFAQSVFVETHNRSFPWVAFFTNRHVRAGTELTWDYGYEAGSMPETEISCWCGVQKCRKK
TLYKCSARGHKLLLFGLVLNTSSFKFGIVLLRRRDKCDLFTSTPQWVAGESQPVTSEESG
AFFCLGSPKDKPGFVLPTTAKPQLEARAQAPSGTRTRDLSSATPKGAGMYREPLPHHVTL
TPPIPAHTPDSSQSAARSPTPSPGGCYWACSALPQGPPTSVRTPLRRKRAVVPAGFGGGG
VRVRAPCASSALPLVEEEPPAPGDDSHFRFCSSEGESRFSKAAEEVCNSDLFCYEIKGEK
IKHCFAVLCSSCPAYDSSVHCFVFCPRLSVPGALRIMAKMVRRTCAFCSDGEAASIMYVA
KEQNIAAHQNCLLFSSGFVESEEYNPENLDLRFDVESVLNELKRGKRLVCNFCRKKGATV
GCEERACRRSYHYFCALCDDAAIETDEVNGVYRVFCSKHDPGNRTNHYDAANKRKRHTSK
SSTIMEQMRAEETAEENRLRILRRKSSRHKVRIDFLRKCKQAGLLDDIFEEMLDTLHLAQ
EKLMDDNTSETEYEETVISLFDCGLFENILTNIHSGTEEKIQELLESKKRLDNQIELLQE
LKEVSLPSQESAASTSSTVSE
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggaggggaaccgaatgctgcgtgactgtcctgaagagaagaaccgtatcacttccagg
aaggagacagctgaaggtgatttgaaggcattttggacgcaactggaaagtagaagagtg
gatctcatatttgagcaggtgcaggaagtactgctgctgctaaaggaaaagatcaagaat
ggaactgccacaaatcaagaatgctggcaggcttgggcattggtgaacgaagctgatctg
ggtgatcttttaacgttgacaaatgtaaatgatgttcttgatggagaggatatacaggaa
cccaaacctaaatcacagcgtgttgttacggatgacagcagtggaaactctgtagagggt
tcacacagcaaaaaggagaagattgaaaaatcagattcagagagtgaggaagcatcgagt
gaaattcaacgtgtacctttaaatccccgctatcggatccacaagtgctccagtgcatgt
ctctccaacagagcagtaagctcctacaagggtgaaaatcctcttaagataccaatactg
tttcactttcaaagacgccatgcgaaagcagactgcctttcaaaatcactggatgtgcat
tataaagctccctgtggcagaagtctgagaagttttcaagatgttcaaagttatttgttt
gagacaaaatgtgatttcttatttattgatcacttctcttttaacacatacgtcctgttg
ggcaggaacactgtaaatccagaaccccttgtatttgatcttgatatcagcaatggagct
gaatctgtgcctatttccttctgtaatgacattgaccgtgccagattaccttattttaaa
taccggagggcatcgtggcctcgtggatattatctcaacaatttatccagcacttttctt
gattcatgtgactgcacggatggctgcattgataggtcaaagtgtgcatgtctacagcta
actgcaagaggctgccgtaaagtttctgtgtctcctaatgctaaaatgtctcgtggatac
agttacaaaagactggaagggcctgttcctagtgggatttatgagtgcagcgtgtcatgc
agatgtgacaagatgatgtgtcagaacagagttgtacagcatggcattcaagttcggttg
caagtgttcaacacagagaagaagggttggggtgtccgctgcctggatgacatcgacaag
gggacgtttgtttgtacttactcaggcaggttaatgagcagagctgaagttcaagagctg
ggaggtgctgatcaagacttgaaggaggagagtgctgtgaatgacagagggcaaagcttc
ttctccaaaaaaagaaaactcgactccagctgttcagactctgagattgaactcgtgctg
actggcaaagatgacattcttgagcatcagcagtctgctgttaatgaaaatgactcaact
ccaattcatccaaggaatttgaatactgcagccacgagaaggcttggaactagaatagct
gttgtggataatcaccagctgaaaatggaagtcgatacactggtgcacagtgctggctca
gatgaagataatagttctcagcctcagcagtcaagtgaaacagaactgacaagtgggaca
aacaaagaaagatcctcccagaagcagagggtagaagacctggtggaagttggacagacg
gagcctgctgaaatggacagtgctgaatgcagaaggaagagtctgtctctgaagggtgtt
gcttgtggcagatcagacgtgctgaacgataaatacgttgtgaagccatccacaaaggtt
ctacaaaaagctgactgcgtagaggaagctcacagacaggcaaaacaaggcatattttgt
gtggaagcagacggtgacagaacgcttctgaagaatgctaacaatgaaaatatctatata
ctagatgccacaaaagaaggaaatgtgggtcgttttcttaatcacagctgctgccccaat
ctctttgcacagagtgtgtttgtagagacgcacaacagaagtttcccatgggttgcattc
ttcacaaacaggcatgtgagagctggaactgaactcacgtgggattatggctatgaagct
ggaagtatgccagagacagagatttcctgttggtgtggagttcagaaatgcaggaagaaa
accttatacaaatgcagtgcccgtggccataagctgttgctttttgggttggttctgaat
acttcaagcttcaaatttggaattgtgctgctacgcagacgggataagtgtgacctcttt
acgagcacacctcagtgggtggctggagagagtcagcctgtgacaagcgaagaatcagga
gctttcttctgcctcggatcacccaaggataagcctggttttgtcctcccgaccacggca
aaaccgcagctggaggctcgcgctcaagccccgagcgggactcgaacccgcgacctcagc
tctgccacgcctaaaggcgcgggaatgtaccgagagccgctccctcaccacgtgaccctc
acacctccaatccccgcccacactccggacagcagccaatcggctgcgcgaagccccacc
ccgtcgcccggggggtgttactgggcatgctccgcgctcccccagggcccgcccacttcc
gtgcgcacccccctcaggcggaagcgcgccgttgtgccggccgggtttggaggtggcggc
gttcgggtgcgggcgccctgcgcttcatcagctctcccattagtggaggaagagcctcca
gctcctggagatgacagtcactttaggttctgcagtagtgaaggtgaaagtcgcttctca
aaagctgcagaagaagtttgcaacagcgacttgttttgctatgaaataaagggtgagaaa
atcaagcattgctttgctgtcctctgctcctcctgcccggcttatgacagttctgtccat
tgctttgtgttttgccccaggctttctgttccaggagctctccggataatggcgaaaatg
gtgagaaggacgtgtgcgttctgttcagatggggaggctgcttctataatgtacgttgcc
aaagagcaaaatattgcagctcatcagaattgtttgttattttcctctggatttgtggaa
tctgaagagtataaccctgaaaatctagatctaaggtttgatgtggaatccgtgttgaat
gaactcaagagaggaaagcgtctggtgtgcaacttctgtcgcaagaaaggagccacagtg
ggatgtgaggagagagcctgccgcaggagctaccactacttctgtgccctgtgcgatgat
gcggccatagaaacagatgaagtaaatggagtctaccgagtgttctgctcaaaacatgac
ccagggaacaggaccaatcactacgatgcagctaataagaggaaaagacacacatcaaaa
tcttccaccatcatggaacaaatgagggcagaagagacggcagaagaaaacagattacga
atactaagaaggaaaagcagcagacacaaagtccgaatcgactttctcaggaaatgcaaa
caagctgggcttctggatgacatatttgaagagatgctggacacccttcacttggcacag
gaaaagctgatggatgacaacacttcagagacagagtatgaagagacagtaatatcactc
tttgactgtggactgtttgaaaacatactgacaaatattcattcagggacagaggagaaa
atccaggaactgctggaaagcaagaaaagactggataaccaaatcgagctcctgcaggag
ttaaaagaagtttccctcccttcccaagagagtgctgccagtacgtccagtacagtgtct
gaataa
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