Gavialis gangeticus (Gharial): 109286884
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Entry
109286884 CDS
T07453
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109286884 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ggn04090
]
109286884 (VCAM1)
04091 Lectins [BR:
ggn04091
]
109286884 (VCAM1)
CD molecules [BR:
ggn04090
]
Proteins
109286884 (VCAM1)
Lectins [BR:
ggn04091
]
I-type lectins (Siglecs)
109286884 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set
Ig_5
Ig_4
Ig_6
Adeno_E3_CR1
DUF2808
ICAM_N
C1-set
Motif
Other DBs
NCBI-GeneID:
109286884
NCBI-ProteinID:
XP_019357236
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MARTVPSVTVLFLMFMTAKAFELEIIPAVKVAAQIGGKLLLICRTTGCESPVFSWRTQLD
SPLGGTVSNEGSTSNLTMNPVTFENDHAYLCSARCGSEKKEKGIKVELYSFPSDPVIMIS
KPLYAGEKGSIICKIPNIYPADRLVVQLQKEGELPSRKEFYDDPSDKNTETKYISYHFTP
TVEDIGKEITCVAELPVVEMEFEPKKRQTSEKLNVTFGPQNTAITMSPNATVEVGSTVVL
YCMSESNPPAKILWGKQQDDKSIQHIIENDTLTIPHAQLSDSGLYICEAINAAVDKTQRT
TVSISIQVPPKDTMLLAFPSDAVKEGDTVTISCTSTGNPAVHIVLKKKMGDVDQVLDSEG
GNYTIHRAQMEHAGVYECESRNELGQQFQNITLNVKVPPQNTTVLIYPSESVNEGVNVTI
TCTTYSNPPPEIILKKVHPYNKTILSSKNGTFTLYNVTRNDTGKYLVNVSNEAGTDIEVI
EIAVIGRPVEPEYVRPVIIVLSCLSVLTIPAVAVLVYLSRKAKINGSYHVANAPGPKV
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaacagttccatcagtgacagtcctttttctgatgttcatgactgctaaagct
tttgaactggagatcatacctgcagtcaaagttgctgctcagattggaggtaaattgctg
ctgatctgccgtactactggctgtgagtccccagttttctcttggagaactcaactggat
agccccctaggagggacggtgagcaatgagggaagcacctccaacttgaccatgaatcct
gttacctttgagaacgaccatgcttacctctgcagtgcccgttgtggatctgagaaaaaa
gagaagggcatcaaggttgaactttactctttccccagtgatcctgtcattatgatcagc
aagccgctctatgctggggaaaagggcagtatcatttgtaaaattcctaacatatatcct
gctgaccgcttagtggtacagctgcagaaagaaggagaacttccttccaggaaagaattt
tatgatgacccaagtgacaaaaacacagagacaaaatatatatcgtatcactttaccccc
accgttgaagatattgggaaagagattacttgtgtggctgaattaccagttgttgaaatg
gagtttgaacccaagaaaagacaaacatcagagaaactgaatgtcacttttggcccacaa
aatactgccatcaccatgtctccaaatgcaacagtggaggtagggagtactgtggttctc
tattgtatgagtgagagtaatccaccagcaaaaatactttggggaaaacagcaagatgat
aaaagtattcagcacattatagaaaacgacacccttaccattccacacgcccagctaagt
gattcaggactgtacatttgtgaagctatcaatgcagcagtggacaaaactcagagaaca
acagtgtccatttctatacaagttccaccaaaagacacaatgcttttggctttcccttca
gatgctgtaaaagaaggtgacactgttaccatctcttgcacatctacaggcaacccagct
gttcatattgtcttgaaaaagaaaatgggggatgtggatcaggtgcttgactctgaaggt
ggcaattataccatacacagggctcagatggaacatgcaggagtgtatgaatgtgaatcc
aggaatgaactaggacagcagtttcaaaacataacacttaatgtcaaagttccccctcaa
aatactacagtgttaatatatccatcagaatctgtcaatgaaggggtaaatgtcactatt
acatgtacaacctacagtaacccaccaccagagataatcctgaaaaaggtccatccatac
aataaaaccatcctgtcatcaaagaatggaacctttacactatataatgtcaccagaaat
gatacaggaaaatacttggttaatgtttccaatgaggctggaactgacattgaagtgatt
gagatagctgttataggaagaccagttgaaccagagtatgtgaggcctgtgattattgtg
ctctcttgtttatcagtgttgacaatacctgcggttgcagtgctggtttacctgtcaaga
aaagcaaagataaatggatcctaccatgttgcaaatgcaccaggaccaaaagtgtaa
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