Gavialis gangeticus (Gharial): 109290744
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Entry
109290744 CDS
T07453
Symbol
GRIN2A
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04020
Calcium signaling pathway
ggn04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
109290744 (GRIN2A)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109290744 (GRIN2A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ggn04040
]
109290744 (GRIN2A)
Ion channels [BR:
ggn04040
]
Ligand-gated channels
Glutamate (ionotropic)
109290744 (GRIN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
109290744
NCBI-ProteinID:
XP_019363018
LinkDB
All DBs
Position
Unknown
AA seq
1321 aa
AA seq
DB search
MSTFFQFGASIQQEAIVMLKIMQEYDWHVFSLVTSTFPGYRDFINIIKTTVENSFVGWDM
QNVIVLDTAFGDAKTQIQLKKIHSSVILLYCSKDEAVYILDEARSLGLTGYDFFWIVPSL
VSGNTEITPKEFPSGLISVSYDEWDYSLEARVRDGLGIIATAASTMLEKYSFIPEAKTSC
YGQLEKNERPSHTLHKFMINVTWEGKDLSFTEDGYQAQPKLVVIVLNKDRAWEKVGKWEN
KTLSLKYSVWPRFSSFIDSDPDDNHLSIVTLEEAPFVVVEDVDPLTESCVKNTVPCHKFV
KINNSTNEGMNVKKCCKGFCIDILKKLSKTVKFTYDLYLVTNGKHGKKVNNVWNGMIGEV
VYQRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVM
MFVMLLIVSAMAVFIFEYFSPVGYNRNLAKGKAPHGPSFTIGKAVWLLWGLVFNNSVPVQ
NPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDKKFQRPYDYSPPF
RFGTVPNGSTERNIRNNYPDMHLYMTKYNQKGVEDALVSLKTGKLDAFIYDAAVLNYKAG
RDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLTGIC
HNEKNEVMSSQLDIDNMAGVFYMLAAAMALSLITFVWEHLFYWKLRFCFTGVCTDRPGLL
FSISRGIYSCIHGVHIEEKKKSPDFTLTNSQTNMLKLLRTAKNMTSINPSRINSPKRTAD
FIQRGSLIMDMVMDKGNQIFSDNRSFQPKDNFLGDNMSELQTFAGNRHKDNLNNYVFQGQ
HPLTLNESNPNTVEVAVTAEAKVNSRPRQLWRKSVESLRQESLRQNQGSQRENGSEENRQ
LSVKSQRYLPEEIVHSDVSDTSSRATCHMEPENNNKHHKTKDNFKKRSVVSKYPKDCSEV
ELTYLKTKQSAPRDKIYTIDGDKEPGFHLDPPEYIENIVLPETIEFPDVYQDHNDNYRKA
EQVNRTPLHNEGSLPDNDQYKLYSKHYSLKDKNTSVVDVNERYRQNSTHCRSCLSNLPSY
TGHFLSRSPYKCDACLRIGNLYDIDEDQMLQETTNSAHPEEMYERDWVQNNSIQYQKKNK
LRISRQHSFDNILDKPREIDVGRPARSISLKEKERFLEGSPYANMFNLPQNKLLSHKASL
LTHALEDSKRSKSLYPDHSADNPFLHSYRDDQHLTLRRSPSDLYKQSLPSQARNDNYLRS
SIKSTASYCSRDGRVHNGMYISEHVMPYVANKNSMYSAPRVLNSCSNRRVYKKMPSLESD
V
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgtccactttcttccagtttggggcttctatccagcaggaagccattgtcatgctgaaa
atcatgcaggagtatgactggcatgtcttttctctggtgaccagcacttttcctggatac
cgagactttataaatatcatcaagaccacagtggaaaacagttttgtgggctgggacatg
cagaatgtgatcgtacttgatactgcctttggagatgctaagacacagattcagctaaag
aaaattcattcatctgttatcctgctttattgttctaaggatgaagctgtttacatccta
gatgaggcacgttccctgggccttacgggttatgattttttctggatagttcccagtctg
gttagtgggaacacggaaatcactcccaaggaatttccttcagggctaatttcggtgtca
tatgatgaatgggactacagtttagaagctcgagtacgggatggccttgggattatcgcc
acagctgcatcaactatgttggaaaaatactccttcattcctgaagcaaaaaccagctgc
tatgggcaactagagaagaatgaacgtccatctcacacactacacaagtttatgataaat
gtgacttgggaaggtaaagatttgtccttcacagaagatggctaccaggcacaaccaaag
ctggtggtgatagtactgaacaaagatcgagcatgggaaaaggtgggcaaatgggagaac
aagacactaagcctgaagtattccgtatggccaagatttagttcttttatagacagcgat
ccagatgacaaccacttgagtattgttaccttggaggaggccccctttgttgtagttgaa
gatgtggaccctttgacagaatcttgtgtgaaaaacacggtgccatgccacaaatttgtc
aaaattaacaactcaactaacgaaggaatgaatgtaaagaagtgctgcaagggattctgc
attgacattctgaagaagttatctaaaactgtgaagttcacatatgacctgtaccttgtg
accaatgggaagcatggcaaaaaagtcaataatgtatggaatggaatgattggtgaagtg
gtctatcaaagggcagttatggctgtaggttctctcactatcaatgaagaacgttcagaa
gtggttgacttttcagtgccatttgttgagactggaattagtgtcatggtttcacggagt
aatggcactgtttctccatctgcatttctagagccttttagtgcttctgtctgggtgatg
atgtttgtgatgcttctcattgtgtccgccatggctgtctttatatttgagtactttagc
cctgtaggatataacaggaacttagcaaaggggaaagctccccatggaccatcttttacc
attgggaaagccgtgtggttgctctggggcctggtatttaataactctgtgcctgttcaa
aaccccaaagggacaaccagtaaaatcatggtgtcagtttgggcattcttcgctgtcatc
ttcctggctagttacactgccaacttggctgcatttatgattcaggaggaatttgttgac
caggtgactgggctgagtgataaaaagtttcaaagaccatatgattattcacccccattt
cgatttggaactgttccaaatgggagcacagagagaaatatcagaaacaattacccagat
atgcacctctatatgacaaagtacaatcagaaaggagtcgaagatgccttggtcagcctg
aaaactgggaagttggatgctttcatctatgatgctgcagttctgaattacaaggctgga
agagatgagggttgcaaacttgtcacaataggcagcggatacatctttgctactacaggc
tatggaatagcacttcagaaagggtcaccttggaagagacagattgacttagccctcctt
cagtttgttggtgacggagagatggaggaattggaaacactgtggctgacaggtatttgt
cacaatgagaagaatgaagtcatgagcagccagctggatattgacaacatggcaggcgta
ttttacatgcttgcagcagccatggccctcagcctaataacctttgtttgggaacatttg
ttttactggaaactcagattctgcttcactggggtctgcacagataggccaggattgttg
ttctccatcagcaggggtatttatagctgtattcatggagtacacattgaggaaaaaaag
aagtcacctgactttactttgaccaattcccaaaccaatatgttaaaactattacgaaca
gccaaaaacatgacaagcattaatccttcaagaattaactcccccaaaagaacagctgat
tttattcaaaggggttccttaattatggatatggtcatggataaggggaaccagatattt
tctgacaatagatcttttcaaccaaaggacaattttcttggtgacaatatgagtgaactg
cagacgtttgctggcaaccgtcataaagacaatcttaataactatgtattccaaggtcag
catcctctcacactgaatgaatctaatccaaatacagtagaggttgctgttacagcagaa
gcaaaagtaaactccagacccaggcagctttggagaaaatctgtcgaatctttacgtcaa
gaatccctacgtcagaaccaaggttcacagagagaaaatggttcagaagaaaacagacag
ctttctgtgaagagccaaagatatcttccagaagagattgtccattcagatgtttcagat
acctcaagccgagccacttgccatatggaacctgaaaataataacaaacaccacaaaacc
aaggacaattttaaaaaaagatctgtggtgtcaaaatacccaaaggactgtagtgaagtg
gaactgacatatctaaaaacaaaacaaagtgctccccgggataaaatttacaccattgat
ggtgataaggaaccaggattccacctggatccaccagagtatattgaaaatattgttctt
ccggagactattgaatttcctgatgtttatcaagaccataatgacaactacaggaaagca
gaacaagttaacaggactcccttgcataatgaaggcagtcttccagataatgaccagtac
aaactttattcaaagcactatagcttaaaagataaaaatacttcagtagttgatgtgaat
gagagatacaggcagaattccacccactgcaggagctgtctttctaatctgcccagttac
acaggccactttttaagccggtctccctataaatgtgatgcttgcttgaggattgggaac
ctctatgacattgatgaagatcaaatgttgcaagaaacaaccaactcagcgcaccctgaa
gaaatgtatgaacgtgactgggtccaaaataattctatccagtaccagaaaaaaaataag
ttgagaatcagcaggcaacattcttttgacaacatccttgataaaccccgagaaattgat
gttggaagacctgctcgaagcataagcttgaaagagaaagagaggttcctagaaggcagc
ccgtatgcaaatatgtttaatctcccccaaaacaaactgttgagccacaaagcctcactt
ttaacgcatgctctggaggacagtaagcggagcaagtccttgtatcctgatcattctgca
gataacccttttctgcactcttatcgtgatgatcagcacttaactctaagacgaagtcca
tctgacctctataaacaatcactaccatcacaagcaagaaatgataattatttaaggtca
tccataaagtccacagcctcgtactgttccagagatggtcgggtccataatggcatgtac
atttcagagcatgttatgccttatgttgcaaataagaatagtatgtactcagctccaagg
gttttaaattcctgcagcaatagacgtgtgtataagaaaatgcctagtcttgaatcagat
gtttaa
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