Gavialis gangeticus (Gharial): 109294373
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Entry
109294373 CDS
T07453
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04010
MAPK signaling pathway
ggn04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109294373 (CACNA1H)
04020 Calcium signaling pathway
109294373 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ggn04040
]
109294373 (CACNA1H)
Ion channels [BR:
ggn04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
109294373 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
109294373
NCBI-ProteinID:
XP_019368242
LinkDB
All DBs
Position
Unknown
AA seq
2505 aa
AA seq
DB search
MTDGERREPFQPPASEEVRVPIASLPSRAPRPGQDEDALSACKSIQGSLGSGGSPTRDPA
RDVGSEEEEQVPYPALAPAVFFCLKQTTRPRSWCLKLVCNPWFEHVSMLVILLNCVTLGM
FQPCEDVKCKSERCTILEAFDHFIFAFFAVEMVIKMVALGIFGQKCYLGDTWNRLDFFIV
MAGMLEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFF
VFFIFGIVGVQLWAGLLRNRCFFDSNFAMSYNLTFLHPYYQPDDGEDNPFICSSHRDNGM
QKCSNIPNLKHLKVECTLSMDPYTPNLYNPDFSNRNACINWNQYYNVCMAGDVNPHNGAI
NFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIA
TQFSETKQRENQLMQEQRARYLSNDSTIASFSEPGSCYEELLKYICHIFRKVKRRTLRLY
NNWQSKRRKKVNPNSTTNGQSSRGRKRITSIHHLIHHHHHHHHHHYHISNGSPRGPRSNP
EICGLELKVMKPGGQLMLPSPSPNLQSPPAPDSESVHSIYHADCHVEAPQVKCKSSNTPA
SIKLAAGLTNHGNMNYPTILPSPASKANSVPGPKGKKNGSSPVPMVSSPVRLNADSFGKL
QHLMGEHGLRRASSRLSGLNVPCPLPSPQASMLTCELQNCPYCASILEDPEFEFSESDSY
DSDNNGVYEFTQDLRHGDQRDQIQQQRNKRRKKKKKPKERNKVARLWSAFGNKLKKIVES
KYFNRGIMIAILINTLSMGIEYHEQPDELTNALEISNIVFTSMFALEMLLKLLAFGIFGY
IKNPYNIFDGIIVIISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTM
DNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTKTGDTVPDRKNFDSLLWAIVTVFQILT
QEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDTDED
KTSANFDEDFEKLKDLRAAGGEMKMYSLAVTPNGHLEARGSMPPPIIMRTAATPMPTPKC
SPHMDSVHTFVDSRRGSNASIDPLSYDQKSLSSLRSSPCANWGPSSNWGSRRSSWNSLGR
APSLKKKNQSGERESLLSGEGKGSTDDESDDAKSSTVSRASLHRRAESLDYRSSLDLPEL
LQLPSMRHSLSINPMAMLPTEYQDCNGKMMHVPNEFFLRIDSHKDDPLDYDDDMEDSYCY
RIRKMLEPYKPEWCKNHEDWSLYLFSPQNRFRAMCQKVIAHKMFDHVVLVFIFLNCITIA
LERPDIDPHSTERIFLSVSNYIFTAIFVAEMMVKVVALGFFSGENTYLQSSWNVLDGVLV
FVSIIDIIVSMASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGN
IVLICCAFFIIFGILGVQLFKGKFYSCEGSDTKNITTKADCTNAHFKWVRRKYNFDNLGQ
ALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPSQNHNPWMLLYFISFLLIVSFFVLNMFVG
VVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRSKEIYMSEAQRRPYYADYSPARRYIH
TLCTSHYLDLFITFIIGVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAVLKLVAF
GFRRFFKDRWNQLDLAIVLLSIMGITLEEIEMNAALPINPTIIRIMRVLRIARVLKLLKM
ATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLDCSEDNPCEGLSRHATF
TNFGMAFLTLFRVSTGDNWNGIMKDTLRECTREDKHCLSYLPVISPVYFVTFVLIAQFVL
VNVVVAVLMKHLEESNKEAKEDAEMDAEIELEMSRGAATPASSGGGGGTAASDGRAPYGS
QEGGKLETPLRVKQQALEALSCENVSLAMPDSDPLEGGETPVMQHTSFCSVPHHHVPTPS
HKAPGHESEEGAACLWAKKESQNFLTVRKISVSRMHSLPNDSYMFRPVMPAKPPYPLHEV
EMESHPCKSQRGSITSTRSQPVGASSSLRIPTECLQLTAGLSYRNTRDLWKIHPPTAAPR
SPSLNRLLCRQEAIRTESVDGQKAEAKDNVQVESGESLQPKKPSQSTLSPPPLHPAPLSL
PGTPPHAPASPSPHRHSSVCTRKHTYSQHSIPSWASSESSDPLHPENSLFESSDLADEEV
SHINSSAKDWREASGSRSLSVSPFASLASSPAHRKNCSTTSLAESGGSREKDLKKFYSVD
TKGFLDKPCWADDQRRHSIGICPSLDRGDCSFEQPAEGAPRSPIHVQLESEYVHGARRKK
KMSPPCISIDPPMEDESGAASRTKASENSLLRRRTPSCESAAYRDSLDLAENPPGEQPSK
AERRVQPLCRGEHLAIPNFSFEQSDVSSLSSLSELLLDSGQSSPSSGESRPDPAALELKK
LEPLQTQGNHPETNKELLVVTKSPLQKHGLVSTTIATDEDVEEPV
NT seq
7518 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgagaggagagagcccttccagccgccggccagcgaggaggtgcgggtg
cccatagcctccctccccagccgggcgccccggcccgggcaggacgaggatgctctcagc
gcctgcaagtccatccagggcagcctgggctcggggggctcccccacccgggatccggct
cgggacgtgggctcggaggaggaggaacaggtcccttacccggcactggcgcccgccgtc
ttcttctgcctcaagcaaaccacccggccgcgcagctggtgcctcaagctggtctgtaac
ccctggttcgagcacgtcagcatgctggtcatccttctgaactgcgtcacgttgggcatg
ttccagccctgcgaagatgtgaagtgcaagtccgagcggtgcactatcctggaggcattt
gaccacttcatctttgccttctttgctgtggagatggtcatcaagatggtagccttgggg
atcttcgggcagaagtgttacctgggagatacgtggaatcgcctggacttcttcatcgta
atggctggcatgttggaatattcgctggatggacacaatgtaagcttatccgccatccga
accgtccgggtactcaggcctttacgagccattaacagggtcccaagtatgcgaatactc
gtcaccctgctgttagatactctgcctatgttaggcaacgtccttctcttgtgcttcttt
gtcttcttcatctttgggatcgtcggcgtccagctctgggcagggctgctgagaaacagg
tgtttcttcgacagcaattttgcaatgtcatataacctaactttcctgcatccatattat
cagccggacgacggagaggataatccattcatctgctcgtcccatcgagataacggcatg
cagaaatgctccaatatcccaaacttgaagcatctcaaagtggagtgcaccttgagcatg
gacccctacaccccaaatttgtataacccagatttcagcaacagaaatgcctgcataaac
tggaaccaatattacaacgtatgcatggcaggggatgtgaacccacataatggagctatt
aattttgataatattggctatgcctggatagctatttttcaggttataaccctggaagga
tgggttgacatcatgtattatgttatggatgcacattctttttacaattttatatatttt
atattgcttataatagttgggtctttcttcatgattaacttgtgcctggttgtgatagca
acacagttttctgaaacaaaacagcgggagaaccagctgatgcaagagcagcgggcccgc
tacctctccaatgacagcacaattgccagtttctcggagccaggcagctgctacgaggag
ctcctcaaatatatctgccacatcttcaggaaggtgaagcgccggacgttacgcctgtac
aacaattggcagagcaagcgccggaaaaaagtcaaccccaacagcaccaccaacgggcaa
agcagccggggcaggaagcgcatcacctctatccatcacctcatccaccaccaccaccac
caccaccaccaccactaccacatcagcaacggcagcccccggggcccgcgctccaacccg
gagatctgtggcctggagctgaaggtcatgaagccaggaggccaactcatgcttccctct
ccatcgcccaatttgcagagccctcccgctcccgattcggagtcggtgcatagtatttac
catgccgactgccacgtcgaggccccccaagtgaaatgcaagtcttccaacacccctgcg
agtattaagctggctgctgggctcaccaaccacggcaacatgaactacccaaccatcctg
ccttctccggctagcaaagccaactcagtcccagggcccaaaggaaagaaaaacggcagc
tcgcctgtgcccatggtgagcagcccggtgcgcttgaatgcggattcgtttgggaagctg
caacacctgatgggagaacatggtctgcgcagggcttccagcaggctgtcagggttgaac
gtgccgtgcccgctgcctagcccccaggccagcatgctgacctgcgagctccagaactgc
ccctattgcgccagcatcctggaggaccccgagttcgagttcagcgagtccgacagctac
gactccgacaacaacggcgtgtacgagttcacgcaggacctgcggcacggggaccagcgg
gatcagattcagcagcagaggaacaagaggaggaagaagaagaagaaacccaaggagagg
aataaagtggccaggctgtggtcggctttcggcaacaagttgaaaaagatcgtggagagc
aagtatttcaaccgggggattatgatcgccattctgatcaacacactgagcatggggatc
gagtaccacgagcagccggatgagctgaccaacgccttggagatcagtaacattgtcttc
accagcatgtttgccctggagatgctcctcaagctcctggcctttggcatcttcggttac
atcaagaacccatacaacatcttcgatgggatcatcgtcatcatcagtgtctgggagatc
atcggccagtcggatggaggtctttctgtgctacgaacttttcggctgctcagagtcctc
aagctggtgcgtttcatgcccgctcttcgccgtcagctcgtggtcctgatgaagacgatg
gataacgtggccaccttctgcatgctgctcatgctcttcatattcattttcagcattctc
ggcatgcatctttttggatgcaagtttagcctgaaaacaaagacgggggacaccgttcca
gacagaaagaacttcgattccttgttgtgggccatcgtgactgtctttcagatcctcaca
caagaagactggaacgtggtgctctacaacgggatggcatccacctcctcgtgggctgcg
ctgtacttcgtggccctgatgaccttcggcaactacgttctcttcaacctcctcgtagcc
atcttagtcgaaggcttccaagcagagggtgatgccaacaggtcagacacggatgaggac
aagacatctgccaacttcgatgaggattttgagaagctgaaagacctccgggcagcaggt
ggggagatgaagatgtactctttggccgtcaccccaaacggacacttggaggcccgggga
agcatgcctccgcccatcatcatgcgcaccgccgctacgcccatgcctacgcccaagtgc
tcgccgcacatggactcggtgcacacctttgtggactcgaggagagggagcaatgcctcg
atagatcccctgagctacgatcaaaagtccttgtccagcctccgcagctcaccctgtgca
aactggggacccagcagcaactggggaagccggcgctcaagctggaatagcctaggccgg
gccccgagtctcaagaagaagaaccagtctggggaaagggagtccctgctctccggagag
gggaaagggagcacggacgacgagtctgacgatgccaagtccagcaccgtcagcagggcg
tccttgcaccgccgggcagagtccttggattacaggagctccttggacttgcccgagctt
ctccagttgcccagcatgcgccattccctcagcatcaaccccatggccatgctgcccacc
gagtaccaggactgcaacggcaaaatgatgcacgtgcccaacgagtttttcctgcgcatt
gacagccacaaggacgaccccttggactacgacgacgacatggaggatagttactgctac
aggatccgcaaaatgctggagccctacaaaccagagtggtgcaagaatcacgaagactgg
tccctctacttgttttctccgcaaaatcggtttcgagccatgtgtcagaaggtgatcgcc
cacaaaatgtttgaccacgtggtgctcgtcttcatcttcctcaactgcatcacgatcgct
ctggagaggcccgacatcgacccccacagcacggagaggatatttctcagcgtctccaat
tatatcttcactgcgatctttgtggctgagatgatggttaaggtggtggctcttggcttc
ttctctggagaaaacacctatctccaaagcagctggaatgtcctcgatggggtcctggtc
tttgtctccatcatcgacattattgtctcaatggcatcggccggcggagcaaagattctg
ggcgtccttcgcgtcttaagactgctgcgaaccttgaggcctctccgagtcatcagcaga
gcccctggtctgaagctggtggtggagactttgatatcatctctgaggcccattgggaat
atcgtgctcatctgctgtgctttcttcatcatctttgggatattaggagtgcagcttttt
aaaggcaagttctactcctgcgaagggtcagacaccaagaacatcaccacgaaagccgac
tgcaccaatgcacacttcaagtgggtccgacggaagtacaactttgacaacttagggcag
gctctgatgtccttgtttgtcctttcatccaaagatggctgggtgaacatcatgtatgac
ggtctggatgctgtgggcattgaccagcagcccagccagaaccacaacccttggatgctt
ctctacttcatctccttcctgctcatcgtcagcttcttcgtgctcaatatgtttgtgggg
gtggtggtggagaacttccacaagtgccggcagcaccaggaagcggaagaggcccgtcgg
cgggaggagaagcgtctgaggcgcctggagaaaaagcgcaggagtaaggagatatacatg
tctgaagcgcagcgccgaccctactacgctgactattccccagcacggaggtacatccat
accctttgtaccagccactatctggacctgttcattactttcatcattggtgtcaacgtc
atcactatgtccatggagcactacaaccagcccaagtccctggacgaagcactgaagtac
tgcaactacgtgttcaccatcgtttttgtgtttgaagctgttctcaagttggtggcattt
ggttttcgacgattctttaaagacagatggaaccagcttgacctcgccattgttctgctc
tccatcatgggcatcaccctggaggagattgaaatgaatgcggcactccccatcaatccc
accattatccggatcatgcgggtgctgagaatagcaagagtactgaaactgctcaaaatg
gccaccggcatgcgagctctcttggacaccgtggtgcaggcgttgccccaggtagggaac
cttggcctactttttatgctcctgttttttatctatgctgccctgggagtggagttgttt
ggaaagctcgattgcagcgaagacaatccctgcgagggcttgagccgccacgccaccttc
accaacttcggcatggccttcctcaccctcttccgggtctcgaccggagacaactggaac
ggcatcatgaaggacacactccgagagtgcacccgggaggacaagcactgcctcagctac
ctgccggtcatctcccccgtctacttcgtcaccttcgtcctcatcgcccagttcgtcctg
gtcaacgtggtggtggccgtgctcatgaaacacctggaagagagcaacaaagaagccaag
gaggatgccgagatggacgccgagatcgagctggagatgtcccgcggagctgccacccca
gccagcagcgggggtggagggggcaccgctgcctccgatggcagggccccgtacgggagc
caggagggtgggaagctggagacgcccctgcgagtgaaacaacaggcactggaggcactg
agctgtgagaatgtgtctttagccatgccagactcagacccgctggagggcggagagact
cccgtgatgcaacacacgtccttctgctctgttcctcaccaccatgtcccgacaccttcc
cacaaagcccccggccacgagtcagaggaaggggctgcctgcctgtgggcgaagaaggag
tcgcaaaacttcctgactgtccgcaagatctcggtgtccaggatgcactccttgccgaac
gacagctacatgttccgccccgtgatgcccgccaagccgccgtacccgctgcacgaggtg
gagatggagagccacccctgcaagtcacagagagggtccatcacctctacccggtcccag
cccgtgggggcaagctcctctctgcgaatccccactgagtgtcttcagctgaccgctgga
ctgtcttaccgcaacacccgcgacctttggaagatccatcccccaacggccgccccgcga
tctcccagcctcaaccggctgctgtgtaggcaggaggccatcaggacagagtccgtggat
gggcagaaagcagaggccaaggacaacgtgcaggtggagtccggcgagagcctgcagccg
aagaagccgtcccagagcaccctaagcccccctccgctgcatcctgcccccctctccctg
ccgggcacccctccgcatgcccctgcctcgccctcgccccacaggcactcgagcgtctgc
acccgcaagcacacgtatagccagcacagtattcccagctgggcttcgagcgagagcagc
gacccgctgcaccctgagaactcgctcttcgagtcctcggacctggcggacgaagaggtc
agccacatcaacagctcggcgaaagactggcgggaggcgtccggatcgaggagcctctcc
gtctccccttttgcctccctggcttcctcgccagcccaccgcaagaactgcagcacaacc
agcctggcagagagcggcggcagcagagagaaggacttgaagaagttttacagcgttgac
acaaaagggttcctggacaagccctgctgggcagatgaccaaagacggcactccattggg
atctgtccctcgctggaccgtggagactgcagctttgagcagccggcggagggcgcgccg
cgctctcccatccacgttcagctcgagtccgagtacgtccacggggctcggcggaagaag
aagatgagcccgccgtgcatttctatagatcctcccatggaggacgaaagcggcgcggcc
tcccgtaccaaagcatccgagaacagcctgctgcggaggaggacgccctcctgcgaatcc
gcggcctacagagattctttggacctggccgaaaacccgccgggggagcagccctcgaaa
gcggagcggcgggtccagccgctgtgtcgaggggagcatctggccatcccaaacttctcc
ttcgagcagtcggacgtgagctccttgagcagcctctcggagctcctgttggacagcggc
cagtcctcgccttcctccggggagtcccgcccggatcccgcggcgctcgagctgaagaag
ctggagcctttacagactcagggcaaccaccctgagacaaacaaggagctcctcgtggtc
acgaagagccccctccagaagcacggactggtctctacgaccattgcgacagatgaagac
gtagaggaacctgtatag
DBGET
integrated database retrieval system
