Gavialis gangeticus (Gharial): 109297804
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Entry
109297804 CDS
T07453
Symbol
GRIN2C
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04020
Calcium signaling pathway
ggn04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
109297804 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109297804 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ggn04040
]
109297804 (GRIN2C)
Ion channels [BR:
ggn04040
]
Ligand-gated channels
Glutamate (ionotropic)
109297804 (GRIN2C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
109297804
NCBI-ProteinID:
XP_019373385
LinkDB
All DBs
Position
Unknown
AA seq
1389 aa
AA seq
DB search
MGRVLTHTLVLSMVLGCSAVIMDILLPGPEEPVVNVAVVFGGSSYPLHVRSRLTPQSFLD
MPLEIHPITVIVNNTNPSTLLTQICDILSSHKIHGIVFEDNVGTEAVAQILDFISSQTHV
PIISISGGSAVVLTPKEPGSAFLQLGVSIEQQIQVIFKVLEEYDWGSFAVITSLYPGYNI
FLDVIRSFTDASYFGWELQDVLTFEMTQDGSNSKTQRLLRQIDAQVMIVYCSREEAEYLF
QVAEEAGLIGPGYVWIVPSLTVGNMEVPPVSFPIGLISVVTESWKMSLRQKVRDGVAIIA
MGALSYYRTRGHLPDVGKDCKTPPSTVTNSTFYSHMLNVTWEHRDFSFNEGGYLVRPTMV
VISLNRHRLWEMVGKWEKGIIHMKYPVWPRYGSFLQPMSDNRHLTVATLEERPFVIVENT
DPTTGVCVRNTVPCRKQTNYTEGGDGPADPYTKLCCKGFCIDILKKLAKAVKFSYDLYLV
TNGKHGKIVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARS
NGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNQNLTSGKKSGGPSFT
IGKSIWLLWALVFNNSVPIENPKGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQEQYID
TVSGLSDKKFQRPQEQYPPFRFGTVPNGSTERNIRSNYPDMHTHMVKYNQRSVEDALTSL
KMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSRWKRAIDLALL
QFLGDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHL
VYWKLRHSVPKSHKLDFLLAISRGIYSCFSGVQNLESPVRVHTPDVTANSAQANVLKMLQ
AAKDMVSTASVGSSLENATRTIENWTNRSENLQTTFSLRTPQLVVQNSSGLNRPTNSSNV
AAAEKLGQAYAQRAIPQPLPAPQQSFVDSRLSASEKWRGITKQPQFLQPLKFRGSCSGDK
ALPGSTVSSFPHLLVKTTPPVECRNHVLLGNHVSTTLSPQKPPRELPPPDIYKEHKRSGA
RGAGKETLPQNIPLGYREDGHREATPFARLLSEKRKGMESPFLPSSCTHDSFPKVDRTCR
PLATACKESEAANLPLLRKEKLGRRANLLRSAWEQNEKRHSLGLQRHDGKSSVQGDIPDL
FPRATLKQMPMPSVQHYPAEALQPSYVCNRKCTEANPRLSWEGQRLVHSQPARLPSYREA
CLQHAAGLHRASSTVVHKQYAYMNSYTNLPVCLGQFCQGAPLLCEHSSAGCVTRAPWSPG
SRDYLVHEDSRRTMYFDSVYRDCRGRSRVEPAFLQMVNMEKRDLLAAQRMNSPYPARSWR
RISSLESEV
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atgggcagagttttgacacacactctggtgctgtccatggtgctgggctgttccgcggtc
ataatggacatcctgctgcccggccccgaggagccagtggtcaacgttgcagtggtgttc
gggggctcttcataccctctccacgtccgcagccgtctgactccccagagcttcctggac
atgcctctggagatccaccccatcacggtgatcgtgaacaacaccaaccccagcaccctc
ctgacccagatctgcgacattctctccagccacaagatccacggcattgtctttgaggac
aacgttggcacggaagccgtggcgcagatcctggatttcatatcctcccagacccacgtc
cccatcatcagcatcagtggaggctcggctgtagtcctgaccccaaaggaacctggctct
gcttttcttcagctgggggtctccatcgagcagcagatccaggtcatcttcaaggttttg
gaggaatatgactggggctcctttgcggtcatcaccagtctgtaccctgggtacaacatc
ttcctggatgtgatccgttccttcacagatgccagctactttggctgggaactccaggat
gtcttgacctttgagatgacccaggatgggagtaactccaaaacccagcgcctgctgcgg
cagattgatgctcaggtgatgattgtgtactgctcacgggaggaggctgagtaccttttc
caggtggcagaggaggccggcttgattggtcctggctatgtctggattgtgcccagcctg
acggtggggaacatggaggtcccgccagtctcgttccccatcggtctcatcagcgtggtg
accgaaagctggaagatgagcctgcggcagaaggtccgggatggcgtggccatcattgcc
atgggggcattgagctactacaggacccgcgggcacctcccagacgtgggcaaagactgt
aagacacctcccagcactgtcacaaacagcaccttctacagccacatgctgaatgtgacg
tgggaacaccgggacttctccttcaatgaaggtggctacttggtgaggcccaccatggtg
gtgatctcgctgaaccggcaccggctctgggagatggtggggaaatgggagaaggggatc
atccacatgaagtaccctgtgtggccccgttatggctccttcctgcagcccatgtcggac
aatcgtcaccttaccgtagccaccctggaagagagaccctttgtgattgtggagaacacg
gatcccaccactggagtctgtgtgcgcaacaccgtgccctgccgaaagcaaaccaactac
accgaggggggagatgggcctgcagacccctacaccaagctatgttgcaagggcttctgc
attgatatcctgaagaagctggccaaggcagtgaagttctcctacgacctctacctggta
accaatggaaagcatgggaagatagtgcgtggcgtctggaacgggatgattggcgaggta
tactacaagcgagcagacatggccattgggtccctcaccatcaacgaggagcgctctgag
attgtggatttctctgtgcccttcgtggagactggcatcagcgtcatggtggccagaagc
aacgggactgtctccccatctgccttcctagagccctacagtccagcagtgtgggtgatg
atgtttgtgatgtgtctcactgtggttgccgtcactgtcttcgtgtttgaatatttcagc
cccgtcggctacaaccagaacctaaccagtggcaaaaagtccggcggcccctccttcacc
attggcaaatctatctggctgctctgggcactggtcttcaataactcggtgcccatcgag
aatccaaaaggcaccaccagtaagattatggtgctcatctgggctttctttgctgtgata
ttcctagccagctacacagctaacctggcggcatttatgatccaggagcaatacattgac
actgtctctgggctgagcgataagaagttccagcggccccaggagcagtacccgcctttc
cggttcggcaccgttcccaacggcagcacagagaggaatattcggagcaactaccccgac
atgcacacacacatggtgaaatacaaccagcgctcagtggaggatgccctgaccagcctc
aaaatggggaagctggatgcctttatctacgatgctgcagtgctgaattacatggctggg
aaggatgagggctgcaagctggtgaccatcggcagtgggaaagtctttgcgaccactggc
tatggcattgccctccagaaggattcccggtggaagagggcgattgacttggctcttctg
cagttcctgggagacggggaaacccagaagctggagaccgtgtggctgtcgggcatttgc
cagaacgagaagaatgaggtgatgagcagcaagctggatattgataacatggctggtgtc
ttctacatgctcttggtggccatgggtctgagcctgctggtctttgcttgggaacacctc
gtgtactggaaactgcggcactctgtccccaagtcgcacaaacttgacttcctcctggcc
atcagcaggggcatttatagctgtttcagtggagtccagaatttggagagccccgtccgc
gttcacacaccagacgtcactgctaactcagctcaggccaacgtgctgaagatgctgcag
gctgccaaggacatggtatcgaccgccagcgttgggagctccctggagaatgccacgcgc
accattgagaactggaccaaccggagcgaaaacctgcagaccacgttctccctcaggacc
cctcagctcgtcgtgcagaacagcagtgggttgaacaggcccaccaactcctccaacgtg
gcagctgcagagaagctggggcaagcctacgcccagagggccattccccaacccctccct
gcccctcagcagtcctttgtggactcccggctgtcagccagtgagaaatggaggggcata
accaagcagcctcagtttctgcaacccctgaagtttcgaggaagctgctctggggataaa
gctcttccaggttccaccgtgagcagcttcccccacctcctggtgaagaccacccctcca
gtcgagtgtagaaaccacgtgctgctggggaaccacgtgagcacgactctctcaccacag
aagcctccaagggagcttcctccaccagacatctacaaagagcacaagcgctcaggggcc
aggggggccggaaaggagaccctcccccagaacattcccctggggtacagggaagacgga
cacagggaagcaaccccctttgcaaggctgctttccgagaagaggaaaggcatggaaagc
cctttcttgccttcctcttgcacccatgactccttcccaaaagtagataggacttgcaga
cctttagcaacagcatgcaaagagtcggaagcagcaaatcttcctctgctgaggaaggag
aagctgggccggagagctaatctgttgcgttctgcctgggagcagaatgagaaacgccat
tccctgggcctgcagaggcacgatggcaaatcatccgtgcaaggcgacataccggacctc
tttcccagagccactctgaagcagatgccgatgcccagtgttcagcactatcctgctgaa
gcccttcagcccagctacgtgtgcaataggaaatgcacagaggcaaaccccaggctctcc
tgggagggccagcgacttgtccattctcagccggccaggctgccctcctacagggaagcg
tgcctacagcatgccgcaggcctgcaccgggcctcttccacggtggtgcacaaacaatac
gcctacatgaactcctataccaacctgcctgtgtgcttggggcagttctgccagggggct
cccctgctctgcgaacactccagtgccgggtgcgtcactcgggctccctggtcgcctgga
agcagggactacttggtccacgaggacagccggaggaccatgtactttgacagtgtatac
agagactgcagaggtcgaagcagagtggaaccagcctttctccagatggtcaatatggag
aagagggacctattggcagcccagcgaatgaacagcccctaccctgccaggtcttggaga
cgaatctctagcctggagtcggaggtgtga
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