Gavialis gangeticus (Gharial): 109301251
Help
Entry
109301251 CDS
T07453
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03020
RNA polymerase
ggn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109301251 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
109301251 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ggn03021
]
109301251 (POLR2B)
03400 DNA repair and recombination proteins [BR:
ggn03400
]
109301251 (POLR2B)
Enzymes [BR:
ggn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109301251 (POLR2B)
Transcription machinery [BR:
ggn03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
109301251 (POLR2B)
DNA repair and recombination proteins [BR:
ggn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
109301251 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
109301251
NCBI-ProteinID:
XP_019377838
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggacgaggatatgcaatatgatgaagacgatgatgaaatcactcctgac
ttgtggcaggaagcatgctggattgttattagctcctactttgatgagaagggcttggtc
cgacagcagctggattcttttgatgagttcatccagatgtctgtacagagaattgttgaa
gatgcaccgcctattgatctacaagctgaagctcagcatgctacaggagaagtggaagag
ccgccccgatatcttctgaagtttgaacagatttacctctccaaacctacgcattgggaa
agagatggtgcaccttcacccatgatgcccaatgaagccagactgagaaaccttacgtat
tctgcccccttgtatgtggacataactaaaacagttattaaagaaggagaggaccagtta
cagacacagcatcagaagacatttattggaaaaattcccattatgttgcgttcaacatac
tgcttattgaatggcttgactgaccgtgatctttgtgagttgaatgaatgtcctcttgac
cctggtggctacttcattattaatggatcagaaaaggttctgattgctcaagagaaaatg
gctacaaacacagtgtatgtgtttgcaaaaaaagactcaaaatatgcttacacgggagag
tgtagatcctgtctagagaattcttctcgaccaacaagtacaatatgggttagcatgctg
gccagaggtgggcagggtgctaagaagagtgctataggtcagcgcattgttgcaacatta
ccctatatcaagcaggaagtgcccattatcattgttttccgtgcattaggttttgtatct
gacagagacattttagagcacatcatttatgattttgaagatcccgagatgatggaaatg
gtcaaaccttccttggatgaagcatttgtcatccaggaacagaatgttgcattaaacttc
atcggctcaagaggtgcaaagcccggtgttaccaaagagaaaagaattaagtatgcaaaa
gaagtcttacagaaagaaatgcttccacatgttggcgtcagtgacttctgtgaaacgaaa
aaggcctattttctggggtacatggttcatagattattactggcagctctgggcagaaga
gaacttgatgacagagatcattatggcaacaaaagactggatcttgctgggcctttgtta
gcttttttgttcagaggaatgtttaagaacttactgaaagaggtgcggatatatgcacaa
aaatttattgacagaggaaaagatttcaacttggaactggcaattaaaaccaggatcatt
tcagatggtctgaagtattcattagcaactggaaattggggtgatcaaaagaaagctcac
caggcccgagcaggagtatctcaggtgttaaatcgcctgacctttgcatccacactttcc
cacttgcgacgcttgaattctcctattggtagagatggtaaattagcaaagcccaggcaa
ctacacaacacgctgtggggtatggtctgccctgctgagacaccagagggccatgcagta
ggacttgtgaagaatttagcccttatggcttacatttctgtggggtctcagccatcccca
attctggaatttttagaagaatggagtatggaaaatctggaagaaatctctccagcagcc
attgcagatgcaaccaagatatttgttaatggctgctgggtaggaatacacaaagatcca
gaacagcttatgaatacactgagaaaactgcgtcgtcagatggacatcattgtgtcagag
gtctccatgattcgggatattagagagcgagaaattcgtatctatactgatgctggcaga
atctgccggccgcttttaattgtggaaaagcaaaagttgctgttgaagaagaggcatatt
gaccaactgaaagaacgggagtataacaactacagttggcaggatcttgtggccagtggt
gtagtagaatacattgatactctagaagaagaaactgtgatgctggcaatgactccggat
gatttacaagagaaaggagttgcgtattgttcaacttacacccactgtgaaattcaccca
tccatgatactgggagtatgtgcatccattattccttttccagatcacaaccagtctcct
aggaacacataccagtctgctatgggtaaacaggcaatgggagtttatatcacaaatttt
catgttcgtatggatacgctagcccatgtactatattatcctcaaaaaccacttgtgact
acacgttctatggagtacttgcgatttagagagctgccagcaggtatcaactccattgtg
gctattgcgtcatacactggatataatcaagaagactcagtcattatgaatcgatcagct
gttgatagagggtttttcaggtctgtgttttatcggtcatacaaagaacaagagtccaag
aaaggctttgaccaagaagaagtttttgaaaaacctacacgtgaaacttgccagggtatg
aggcatgccatctatgacaaattagatgatgatggtttgatagcacctggtgtacgtgtg
tcaggagatgatgtcatcataggcaaaacagtaactctgccagagaatgaagatgaactg
gaaagcactaacagacgtttcacaaaaagagactgtagcacttttctacgaactagtgag
actggtattgtagatcaggtcatggttacactcaatcaggaaggatacaagttttgcaaa
attagggtgcgttctgttagaatcccgcaaattggtgataaatttgctagtagacatggt
cagaaaggaacctgtggtatccagtatagacaagaggatatgcctttcacgtgtgaaggt
atcacacctgacatcatcatcaacccccatgccattccttctcgtatgacaattggtcac
ttgatcgaatgccttcaagggaaggtatcggcaaacaagggagaaattggtgatgctaca
cctttcaatgatgctgtcaatgtgcagaagatttccaatttgttatcagattatggctat
catctgagaggaaatgaggttctttataatgggttcactggtcgcaaaatcacatcacaa
atcttcattggtcctacttactaccagcggctgaaacatatggtagatgataaaatccat
tctcgtgccagagggccaattcagattcttaacagacagcccatggaaggtagatcacgt
gatggtggccttcgttttggagaaatggagcgtgattgtcagattgctcatggagcagct
cagtttttgagagagaggttgtttgaagcttcagacccataccaagttcatgtttgcaat
ctctgtggaataatggcaatagccaacaccaggacgcacacctatgagtgcaggggatgt
cgtaataaaacacagatttcgttggtgcgaatgccatatgcctgtaaactcctcttccaa
gagctaatgtcaatgagtattgcacctcgtatgatgagtgtttag
DBGET
integrated database retrieval system
