Gavialis gangeticus (Gharial): 109303876
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Entry
109303876 CDS
T07453
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04010
MAPK signaling pathway
ggn04210
Apoptosis
ggn04218
Cellular senescence
ggn04620
Toll-like receptor signaling pathway
ggn04621
NOD-like receptor signaling pathway
ggn04622
RIG-I-like receptor signaling pathway
ggn04623
Cytosolic DNA-sensing pathway
ggn04625
C-type lectin receptor signaling pathway
ggn04920
Adipocytokine signaling pathway
ggn05132
Salmonella infection
ggn05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109303876 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
109303876 (NFKB1)
04218 Cellular senescence
109303876 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109303876 (NFKB1)
04621 NOD-like receptor signaling pathway
109303876 (NFKB1)
04622 RIG-I-like receptor signaling pathway
109303876 (NFKB1)
04623 Cytosolic DNA-sensing pathway
109303876 (NFKB1)
04625 C-type lectin receptor signaling pathway
109303876 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
109303876 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109303876 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
109303876 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ggn03000
]
109303876 (NFKB1)
Transcription factors [BR:
ggn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
109303876 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
109303876
NCBI-ProteinID:
XP_019381779
LinkDB
All DBs
Position
Unknown
AA seq
979 aa
AA seq
DB search
MAEDPYIMGVSDPQMFTVDQLMGMNAIFNNSGYITSDIPLRAADGPYLQIIEQPKQRGFR
FRYVCEGPSHGGLPGASSEKNKKSYPQVRICNYVGPAKVIVQLVTNGKSVHLHAHSLVGK
YCEDGVCTVNAGPKDMAVGFANLGILHVTKKKVFETLETRMIDACKKGYNPGLLVHPELN
YLQVEGCGERQLSDREKEIIRQAAFQQTKEMDLSVVRLMFTAFLPDSNGCFTRRLDPVIS
DPIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDENGGMWEG
FGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEVKDK
EEVQRKRQKLMPNFSDSYGGGSGAGGGGGGMYGSGGGGAGSGFGYPSYGYTAFGGMHFHP
GTTKSNTGMKHGLSSDEHEQHRESCNKHNDKQNVKHGAKKEISGRDDSRLCGNKEEEDAT
LSHTAQIDEANSRLQDGLFLEKAMQLAKRHANALFDYAITGDVKMLLAVQRHLTAVQDDN
GDNVLHLAIIHLHAELVQNLLEVMQDLNSDDIINMRNDLYQTPLHLAVITKQADVVEDLL
KAGADVSSLDRHGNSVLHLAAQEGDDKILDILLKHKKTSLMINLSEGEGLNAIHMAVLAN
SMSCLRLLIAAGADINAQEQKSGRTALHLAVEQENISLAGCLLLEGDAYVDSTTYDGTTP
LHIAAGRGSTKLTALLKAAGADPHVENFEPLFDPEDVKGNDDEDEGIVPGTTPLDMATSW
EVYDILNGKPYESKVASDDLLAPGDMKELNEDSKMQLYKLLEVPDPNKNWSALAQKLGLG
ILNNAFRLSPTPSKTLLDNYEVSGGTIKELVDALKQMGYTEAIEIIQKARSVPLTECSQE
NFTSKAPPLSPFVPSTKQQTGELYDIKFQDTESMCDSGVETSFRKLSFTCSESLNSKSSI
TLSKMALGYGQEHSIQGKI
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagatccctatatcatgggagtgtctgatcctcaaatgtttactgtggatcaa
ctcatgggaatgaatgcaatatttaataattcaggttacattacttcagacataccacta
cgagcagcagatggaccatacttacaaatcatagaacagcctaaacagaggggatttcgt
ttccgatatgtatgtgaagggccatcacatggtggacttcctggtgcttctagtgaaaag
aacaaaaaatcgtaccctcaagtccggatctgcaattatgttgggcctgcaaaagtaatc
gttcagttagtcaccaatgggaagtctgtccacttgcatgcacacagtttggtgggtaaa
tattgtgaagatggagtatgtacagttaatgcaggaccaaaggatatggcggtagggttt
gcaaaccttggaatacttcacgtcaccaagaagaaagtatttgaaactctagaaacacgc
atgatagatgcctgtaaaaaagggtacaatcccggactcttagtgcatcctgaacttaat
tatctccaagtagaaggatgtggagaaagacaattatcagatcgggaaaaagaaatcatt
cgccaggcagcatttcagcagacaaaagagatggatctcagcgtggtgcgccttatgttc
acagccttcctccctgacagcaatggctgcttcacaagaagacttgatcctgtcatatca
gatcccatatatgacagcaaagcccccaatgcatccaatttaaagattgtaagaatggac
agaacagcaggatgtgtgacaggaggagaagagatttaccttctctgtgataaggttcaa
aaagatgacattcaaattcgtttttatgaggaagatgaaaatggtggaatgtgggaaggt
tttggagatttttctcctacagatgtacatagacagtttgctattgtgttcaaaaccccc
aagtacagagatgtcaatatcacaaaaccagcatctgtatttgttcaactgcgacggaaa
tctgatctggaaacaagtgaaccaaagccttttctgtactatccagaagtcaaagacaaa
gaagaagtgcagaggaagcgacagaagctgatgcctaacttttctgacagctatggtgga
ggcagtggtgcaggaggtggcgggggtggaatgtatggcagtggaggaggtggtgctggc
tcagggtttggttacccttcatatgggtatactgctttcggaggaatgcatttccaccct
ggtacaacaaaatcgaatactggaatgaaacacgggctttcaagtgatgaacatgaacaa
cacagggaaagctgcaataagcacaatgacaagcagaatgtgaagcatggtgcgaaaaag
gagatctcaggcagggatgactcccgactctgcggtaataaagaggaggaggatgctact
ttgtcacatacagcccaaatagatgaagccaactctaggttacaagatggactgttcctg
gagaaggccatgcaactcgctaaacgtcatgccaatgctctttttgactatgccataact
ggagatgtgaagatgttattagctgttcaacgtcatctcactgctgtccaagatgataat
ggtgacaatgtacttcatttagcaattatccaccttcatgctgagctggtgcaaaacctc
ttagaagtgatgcaggatttgaattctgatgacatcatcaatatgagaaatgatctttat
cagacccccttgcacttggcagttatcacaaagcaggcggatgtggtggaagatctgctg
aaggctggggctgatgtcagttctctggatcgacatgggaactctgtcttgcatttagcg
gcccaggagggagatgacaaaattttggacatactccttaagcacaagaaaacctctctg
atgatcaacctttcagagggggaaggtctcaatgcaattcacatggcagtgctagcaaat
agcatgtcttgcctcaggctgctgattgctgctggagctgacatcaatgctcaggaacaa
aaatctggacgaactgcattgcatctggctgttgaacaagagaacatctctttggcaggc
tgccttctgcttgagggtgacgcatatgttgacagcactacatatgatggaaccactcca
ctccatatagcagctggaaggggctccacaaaactgaccgctcttctcaaagcagcaggt
gcagatcctcatgttgagaactttgagccattgtttgatccagaggatgtgaaaggcaat
gatgatgaagatgaaggaattgtacctggaacgacacctttggacatggccaccagctgg
gaggtgtatgacatattaaatggcaaaccctatgaatcaaaggtggcttctgatgaccta
ctagcaccaggagatatgaaagagctgaatgaagactccaagatgcagctctacaagtta
ttagaagtacctgatccaaacaaaaactggtctgccctggcacaaaagctgggccttgga
atactcaataatgctttcagattgagtcccacaccatcaaaaactctgctggataactat
gaggtttctggtggtacaataaaggagttagtcgatgccttgaagcaaatgggttacaca
gaagcaattgaaatcattcagaaagcacgatccgtcccactaactgagtgcagccaggag
aattttacctccaaggctccaccactatcaccttttgttccatccactaaacaacagaca
ggtgaactttatgatatcaaattccaagacactgaaagcatgtgtgatagtggagtggag
acttccttccgcaaacttagctttacttgttccgagtccctgaacagcaagtcttcaata
acacttagcaaaatggccttgggctacggccaagaacactcaatacaaggcaaaatctaa
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