Gemmatimonas groenlandica: HKW67_08515
Help
Entry
HKW67_08515 CDS
T07783
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ggr
Gemmatimonas groenlandica
Brite
KEGG Orthology (KO) [BR:
ggr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ggr03009
]
HKW67_08515 (rimO)
Enzymes [BR:
ggr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HKW67_08515 (rimO)
Ribosome biogenesis [BR:
ggr03009
]
Prokaryotic type
ribosomal protein modification factors
HKW67_08515 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QJR35545
UniProt:
A0A6M4INB0
LinkDB
All DBs
Position
complement(2018618..2020039)
Genome browser
AA seq
473 aa
AA seq
DB search
MLKFGLVTLGCDKNTVDSERYLADLVAHGGEQVTDMRDADVVVVNTCGFIDAAKAESIEA
IVAAARLKDDGKCQAVFAIGCMVERHKSELEEALPEVDVFLGNSETDRLIPELVERGLLG
GSLVEHPGVRLFGGDLPHVRYLKISEGCDHGCAFCAIPLMRGKHRSFALDDLVKEAQLLE
VQGAREMNLVAQDLAHYGRDRRDGVALPELLEALVRETSIPWIRNMYLYSTGITPRLLEV
IAANSRIVRYLDTPMQHGSDAVLARMRRPERQKTIRERLAQYRAIVPDLAVRTSVIVGFP
GETETDFEILCDFLEEMQFDRVGVFTYSPQEGTRANSMEDDVADSIKQERKERIEELQRA
ITSERYERFLGVESRVLVERASDVAGEMLCRAPWQADDIDGLVHVPINAASGIMTPGAFA
DVRIEHVVDDYDFRATLLRVAEQATAPIRRASRTLPLVGSGIPDSSSVGSFGR
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagttcggtttggtcaccctcgggtgcgataagaatacggtagactccgagcgg
tacctggctgatctcgtcgctcatggcggcgagcaggtgaccgatatgcgtgacgccgat
gtggtggtggtcaacacctgcggcttcatcgacgccgccaaggccgagtcgatcgaagcg
atcgtggccgccgcgcgcctgaaggacgacggcaagtgtcaggcggtgttcgccatcggg
tgcatggtggagcggcacaagtcggagctcgaagaggcactgcccgaggtggacgtgttc
ctcggcaactccgagaccgaccgcctcatccccgaactcgtggagcgcggcctgctgggt
gggtcactggtcgagcatccaggcgtgcgtctgttcggcggtgacctgccgcatgtacgc
tatctgaagatctcggaaggatgcgatcacggctgcgcgttctgcgcgatcccgctcatg
cgcggcaagcaccgttcgttcgcgctcgatgatctggtgaaggaagcgcagttgctggaa
gtgcagggtgcgcgcgagatgaacctggtggcgcaggatctcgcgcattacggccgcgac
cgtcgcgatggtgtggcgttgccggagctactcgaagcgctcgtgcgcgaaacgtcgatc
ccctggatccgcaacatgtacctctacagcaccggcatcacgccgcgcttgctggaggtc
atcgcggccaattcgcgcatcgtacgatatctcgacacgccgatgcagcacggctccgat
gcggtgctggcgcgcatgcgtcgcccggagcgtcagaaaaccatccgtgagcgcctcgcg
cagtatcgcgcgatcgtgcccgatttggccgtgcgtacctcggtgatcgtcggatttccg
ggcgagaccgaaactgacttcgaaattctctgcgatttcctcgaggagatgcagttcgat
cgcgtcggggtgttcacctattcgccgcaggaaggcacgcgcgcgaacagcatggaagac
gacgtcgccgattcgatcaagcaggagcgcaaggagcgcatcgaagagctgcagcgtgcg
atcacgtcggaacggtacgagcgcttcctgggtgtcgagtctcgcgtgttggtcgagcgt
gcctccgacgtggccggtgagatgctgtgtcgtgcgccgtggcaggccgatgacatcgac
ggattggtccacgtaccgatcaacgccgcatcgggcatcatgacacccggtgcgttcgcc
gacgtgcgtatcgagcacgtcgtggacgactacgatttccgtgccacgctgttgcgcgtg
gccgagcaagcgaccgcaccgatccgacgtgcgtcgcgcaccctgccgctggttggcagc
ggtattcctgacagttcttccgtggggagtttcggccgatga
DBGET
integrated database retrieval system
