Gemmatimonas groenlandica: HKW67_15895
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Entry
HKW67_15895 CDS
T07783
Name
(GenBank) pyridoxal-phosphate dependent enzyme
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
ggr
Gemmatimonas groenlandica
Pathway
ggr00260
Glycine, serine and threonine metabolism
ggr00270
Cysteine and methionine metabolism
ggr01100
Metabolic pathways
ggr01110
Biosynthesis of secondary metabolites
ggr01230
Biosynthesis of amino acids
Module
ggr_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
ggr00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HKW67_15895
00270 Cysteine and methionine metabolism
HKW67_15895
Enzymes [BR:
ggr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
HKW67_15895
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Gene cluster
GFIT
Motif
Pfam:
PALP
CBS
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
QJR38265
UniProt:
A0A6M4IVQ5
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All DBs
Position
3725606..3727051
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AA seq
481 aa
AA seq
DB search
MATPHTSDAAPADAAVQEEHIRHRRPYGSVLETIGWTPMIRLARVARGIRTPLYGKADFF
NPGGSVKDRVGMPMIESHERAGTLKPGGTIVEATSGNTGVGLAIAAALKGYRCIFTMPDK
MSQEKVRLLKAFGAEVIITPTAVPHDHPQNYVMMAKRIVSETPGAVLAGQFENPANPAAH
MATTGPEIWEQTDGRITHFVAGAGTGGTITGVARYLKSKNPNIKIIAADPMGSVLAELWR
SKGEGHPTGAPYKVEGVGQDCIPLTLDMSVIDEFISVSDKDAFGMARRLTREEGIFVGGS
AGMIAHAAMNVARRLDDPDACVVTFLCDTGERYLSKVFNDEWMRENQMLDVSPTTIAAVL
GNKDASAPAIVSVAPGASVRQAIRLMALHNVSQVPVMDGAVCIGSVAESQLTSKSLADPK
VLDQSVSDVMDQPFPVVESDQPVESVAKLLSKSNRAVLMKKDGVVQGIVTRFDVLEHLMH
R
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
ctggcgactccccacacgtccgacgcggctccggccgacgcggctgtgcaagaagaacac
atccggcatcgccgcccctacggcagcgtcctggaaaccatcggctggacgccgatgatc
cggctggctcgcgtcgcgcgcggcatccggactcccctctacggtaaggccgacttcttc
aatccgggcggcagcgtgaaggaccgcgtcggcatgccgatgatcgagtcgcatgagcgc
gccggcaccctcaagcccggcggcacgatcgtcgaggcgacgagcggcaataccggggtc
ggtctggccattgccgcggcgctcaagggctatcgctgcattttcacgatgcccgacaag
atgtcgcaggaaaaagtccgactgctgaaagcgttcggtgccgaagtgatcatcaccccg
acggcggtgccgcacgatcatccgcagaactatgtgatgatggccaagcgcatcgtgagt
gagacgccgggggcggtgctggccggtcagttcgagaacccggccaatccggcggcgcac
atggcgacgacgggccccgaaatctgggagcagacggacggtcgcatcacgcacttcgtg
gccggtgccggtacgggtggtacgatcacgggcgtggcgcgctatctcaagagcaagaac
ccgaacatcaagatcatcgccgccgatcccatgggatccgtgctggcggagttgtggcgc
agcaagggcgagggacatcccacgggcgcgccgtacaaggtggaaggcgtgggccaggac
tgcatcccactcacgctcgacatgagtgtcatcgacgagttcatctcggtcagcgacaag
gatgccttcggcatggcgcgacgtctcacgcgcgaagaaggcatcttcgtgggtgggtcc
gccggtatgatcgcgcacgctgccatgaatgtggcacgtcgtctcgatgatcccgacgcg
tgcgtcgtcacgttcctctgcgacaccggcgagcgctatctcagcaaggtgttcaacgac
gaatggatgcgcgagaatcagatgctcgacgtgtcacccacgaccatcgcggcggtgctc
ggcaacaaggacgcgagcgcgccggccatcgtgagcgtggcaccgggggcttcggtgcgt
caggccattcgcctgatggcgctgcacaacgtgtcgcaggtgccggtgatggatggcgcc
gtgtgtatcggcagcgtcgcggaatcacagctcacgtcgaagtcgctggccgatccgaag
gtgctcgatcagtcggtgagtgacgtgatggatcagccgttccccgtggtcgagagcgac
cagccggtggagagcgtggcgaagctgttgtcgaagagcaatcgcgccgtgttgatgaag
aaggacggcgtggtgcagggcatcgtgacgcgcttcgacgtgctcgaacacctgatgcac
cggtag
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