Gossypium hirsutum (upland cotton): 107886807
Help
Entry
107886807 CDS
T04793
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107886807
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghi02000
]
107886807
04147 Exosome [BR:
ghi04147
]
107886807
04090 CD molecules [BR:
ghi04090
]
107886807
Enzymes [BR:
ghi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
107886807
Transporters [BR:
ghi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
107886807
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107886807
CD molecules [BR:
ghi04090
]
Proteins
107886807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
ABC_ATPase
AAA_16
AAA_29
AAA_22
RsgA_GTPase
AAA_15
AAA_5
SbcC_Walker_B
nSTAND1
APS_kinase
DUF815
AAA_25
DUF87
Rad17
DUF1360
Motif
Other DBs
NCBI-GeneID:
107886807
NCBI-ProteinID:
XP_016666374
UniProt:
A0A1U8HSQ7
LinkDB
All DBs
Position
A01:117763356..117768858
Genome browser
AA seq
1329 aa
AA seq
DB search
MSKDSEEIKRIEQWKWSEMQGLELVSDPSLNPKIQTEEASSSSSCSKLESDNNGGNEEKL
QKEVPSIGFNELFRFADGLDYVLMGIGSLGALVHGCSLPIFLRFFADLVNSFGSNANNMD
KMMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQTTKMRIKYLEAALNQDIQYFDT
EVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLGVVPL
IAVIGAIHTITLAKLSAKTQEALSQGGNIVEQTIVQIRVVLAFVGESKALQAYSSALKIA
KKIGYKTGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHYTNGGLAIATMFAVMIGGLG
LGQSAPSMSAFAKAKVAAAKIFRIIDHKPGIDRDSESGLELESVTGLVELKNVDFAYPSR
PDVKILNNVSLCVPSGKTIALVGSSGSGKSTVVSLIERFYDPTSGEVMLDGHDIKTLKLR
WLRSQIGLVSQEPALFATTIKENILLGRPDANDIEIEEAARVANAHSFIVKLPDGFDTQV
GERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLV
IAHRLSTIRKADLVAVLQDGSVSEIGTHDELMAKGENGAYAKLIRMQEAAHETALNNARK
SSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLEGYHPNYRMEKLDFKE
QAGSFWRLVKMNSPEWIYALVGSIGSVVCGSLSAFFAYVLSAVLSVYYNPDHAYMIREIG
KYCYLLIGLSSAALLFNTLQHSFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESAR
IAARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATV
LQKMFMKGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSENKIVRLFSSNLQTPLKHCFW
KGQIAGSGFGVAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLT
LAPDFIKGGRAMQSVFELLDRKTEIEPDDPDATQVPDRLRGEVELKHVDFSYPSRPDIPI
FRDLNLRARAGKTLALVGPSGCGKSSVIALIQRFYEPSSGRVMIDGKDIRKYHLKSLRKH
ISIVPQEPCLFATTIYENIAYGHESASEAEIIEAATLANAHKFISSMPDGYKTFVGERGV
QLSGGQKQRIAIARALVRKAELMLLDEATSALDAESERSVQEALHRACSGKTTIVVAHRL
STIRNAHVIAVIDDGKVAEQGSHSHLLKNYPDGCYARMIQLQRFTNSQVFEMTSGSSSSK
QKEVNEREG
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagattcagaagagataaagaggatagaacaatggaaatggtctgaaatgcaa
ggccttgaacttgtttctgatccttctttaaaccccaaaattcaaacagaagaagcttct
tcatcatcatcttgttcaaagcttgaaagtgacaacaatggtggaaatgaagagaagcta
caaaaagaagtgccttcaattgggttcaatgaattatttagatttgcagatgggttagat
tatgtattaatgggaattggttcacttggagctcttgttcatggctgttctttacctatt
ttccttcgtttctttgctgatcttgttaattcctttggttctaatgctaataatatggac
aagatgatgcaagaagttctgaagtatgcattttatttccttgtggtgggtgctgcaatt
tgggcatcttcatgggcagaaatttcatgttggatgtggactggtgaaagacaaacaaca
aagatgaggattaagtatctagaagcagctttgaatcaagacattcaatattttgatact
gaagttagaacatctgatgttgtttttgccattaatactgatgctgtaatggttcaagat
gctattagtgagaagttgggtaatttcattcattacatggcaacatttgtgtctggcttt
gtggtgggtttcacagcagtatggcaattagctttggttacacttggagttgttccatta
attgctgtaattggagcaatacataccataacattagctaagctctctgcaaaaacacaa
gaagctttatcacaaggtgggaacattgtggaacagacaatagttcaaatccgggttgtt
ttggcttttgtcggtgaatcgaaagcattacaagcttactcatcagcattgaaaatagca
aaaaagataggttataaaactggatttgcaaagggaatgggattgggggcaacctacttt
gtcgtgttctgttcttatgctttgcttctttggtatggaggttatctggttagacatcat
tacactaatggaggacttgccattgccaccatgtttgcagttatgattggtggattgggt
ttgggacagtctgcaccaagcatgtctgcatttgcaaaggctaaagtggcagcagcaaaa
attttccgtattatcgatcataaacccggtatcgatagagatagcgagtcgggtttggag
ttggaatcggttactggattagttgagttgaaaaatgtggattttgcatacccttcaaga
cccgatgtaaagattcttaacaatgtttccttatgtgttccttctggaaaaaccatagct
ttggttggaagtagcggttcggggaaaagcaccgtggtgtcacttattgagagattttac
gatcctacttcaggggaagtaatgctagatggacatgacataaagacattaaagctaaga
tggttaaggtcacaaataggacttgtaagccaagagcctgcactttttgctaccaccatt
aaagaaaacatcctcttagggaggcccgatgcgaacgatatcgagattgaagaagctgcg
agggtggctaatgctcattcattcattgtgaagctacctgatggtttcgacactcaggtt
ggggagagaggacttcaactctcaggtggacagaagcaaagaatcgctatagcaagggca
atgttgaagaatccggcaatcttgttattggatgaagctactagtgcactagattctgag
tccgaaaagctggtgcaagaggcccttgatcggtttatgattgggaggactactctcgta
attgctcatcggctttcaaccattcggaaggctgatcttgtagctgtactccaggatgga
agtgtttcggaaatcggtacgcatgatgaacttatggccaaaggagaaaacggtgcctat
gctaaactcattcggatgcaagaggcagcacacgaaaccgcccttaataatgctagaaaa
agtagtgcaaggccatctagtgctcggaactcagtaagctcaccaatcattgcccggaat
tcatcatatggccgctcaccatattcacgcaggctgtctgacttctctacttcggatttt
agcctttcccttgagggataccaccctaattaccgaatggaaaagcttgatttcaaggag
caagcgggttccttctggcgtcttgtgaaaatgaattcacccgaatggatttatgcttta
gttggttctataggatccgttgtttgcggctcccttagcgctttctttgcttatgtgctg
agtgctgttctcagtgtttactacaacccagaccatgcttacatgattcgagaaatcggg
aaatactgctatctgttaattggactttcatcggctgcacttctcttcaacacactacag
cattctttttgggatattgtgggagaaaatctcacgaaacgggtgcgagagaagatgctg
actgcagtgctgaaaaatgaaatggcctggttcgatcaggaggaaaacgagagtgctagg
attgctgcaaggttagctcttgatgcgaacaatgtacgatcagctattggagaccggatt
tcagttatcgtgcagaacacggcactcatgcttgttgcttgcactgctggttttgttttg
cagtggcgccttgcccttgtcctcattgcagtcttccctgtggttgtagcagccacggtt
ttgcagaaaatgtttatgaaaggtttctcaggagatttagaagctgctcatgccaaggcc
actcaactagctggagaggccattgccaatgtaagaactgttgctgcattcaattccgag
aacaaaatcgttcgccttttctcctcaaaccttcaaactccattgaaacactgcttttgg
aaaggacaaattgcaggaagcgggttcggggtagctcagtttgcactatatgcttcttat
gcacttggtctttggtatgcttcatggcttgtgaagcatgggatctctgatttttccaaa
acaatccgagtctttatggttcttatggtctctgccaatggtgcagccgaaacattgacc
ctggctccagacttcatcaaaggaggtcgagccatgcaatcagtctttgaacttcttgac
cgtaaaactgagattgagcctgatgacccggatgccacacaagttccagaccggcttcgt
ggagaagttgaactaaagcatgtagacttctcttacccttcacgtcctgacatcccaatt
ttccgggaccttaatctccgcgcccgagccggaaaaacccttgcccttgttggtccaagt
ggatgtggtaaaagctcggttattgcacttatacaaagattttacgagccctcatccgga
cgtgttatgatagatggaaaagacataaggaaataccacctcaaatcgctgagaaaacac
atttcaatcgttccacaagagccttgcctctttgctaccactatttacgaaaacatcgcc
tacggacatgaatctgcaagcgaggctgagatcattgaggcagctacactagccaacgcc
cacaagttcatatcctcaatgcctgatggttacaaaacgtttgttggggagagaggggtt
caactttccggaggccaaaaacagagaatcgccatcgcaagggctctagtgaggaaagca
gagcttatgctgctcgatgaagcaaccagtgccctcgatgctgaatctgagagatcagtc
caagaggctctacaccgtgcttgctcgggtaaaactacgattgtggtggctcatcggtta
tcaacaatcagaaatgctcatgtcattgcagtaattgatgatgggaaagttgcagagcaa
ggatcccattcacatttactcaaaaactatcctgatggatgttatgcacggatgatacaa
ttacaaaggttcacaaatagccaagtttttgaaatgacctcaggctcaagttcatcaaaa
caaaaggaagtcaatgaaagagaaggttaa
DBGET
integrated database retrieval system