Gossypium hirsutum (upland cotton): 107886853 Help Entry 107886853         CDS       T04793                                  Name (RefSeq) protein CLP1 homolog   KO K14399   polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] Organism ghi  Gossypium hirsutum (upland cotton) Pathway ghi03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:ghi00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     107886853  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ghi03019]     107886853 Enzymes [BR:ghi01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.1  Phosphotransferases with an alcohol group as acceptor     2.7.1.78  polynucleotide 5'-hydroxyl-kinase      107886853 Messenger RNA biogenesis [BR:ghi03019]  Eukaryotic type   mRNA processing factors    3' end processing     Pre-mRNA cleavage factor IIm (CFIIm)      107886853 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CLP1_P Clp1 CLP1_N nSTAND3 CbiA AAA_22 SRPRB ATP_bind_1 ABC_tran FtsK_SpoIIIE AAA_29 GTP_EFTU AAA_24 Motif Other DBs NCBI-GeneID:  107886853 NCBI-ProteinID:  XP_016666426 UniProt:  A0A1U8HK51 LinkDB All DBs Position D04:8541507..8545665 Genome browser AA seq 444 aa AA seqDB search MSYGGATTMTAPPAIGGSASASTIKQVKLERESELRIEVGNETPLKLRLLNGSAEIFGSE LAPEMWLTFPPRLKFAVFTWYGATIEMDGATETDYTADETPMVSYVNVHAVLEGRRNRAK ALSPNDSEASQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITVPGC IAATPIELPIDPVEGIPLEMPLVYFYGHTTPSNNVDLYKTLVNELAQMLETQFARNAESR AAGMVINTMGWIEGTGYELLLHAIDTFKANVVLVLGQEKLFSMLKAVAKSKPNVDVVKLQ KSGGVVSRNAKYRQKSRGYRIREYFYGLANDLSPHSNIANFSDLLVYRIGGGPQAPRSAL PIGADPIANPLRVTPVNIDRDLLHMVLAVSYAKEPDQILSSNVAGFIYITDIDIQRKKIT YLAPSAGELPSKYLIMGTLTWLET NT seq 1335 nt NT seq  +upstreamnt  +downstreamnt atgtcctacggaggtgcaacgaccatgacggcgccgccggcgattggtggctccgcgtcg gcgtcgactataaagcaagtgaagttagagagagaaagcgagctgagaatcgaggtgggt aatgaaacgccgcttaaacttcgattacttaacggctcagccgagattttcgggtccgaa ttggcccctgagatgtggctcactttcccccctcgcctcaaattcgctgttttcacttgg tatggtgctacaattgagatggatggtgctactgaaactgattatacggcagatgagaca cctatggtcagttacgtgaatgtacatgctgtactcgaaggacgaagaaaccgtgctaaa gctttgtcaccaaatgactcggaggcatcccagggacccagagtgattgttgtggggcct actgattctgggaagagcaccttatcaaggatgcttcttagttgggcagctaaacaaggt tggaaacctacttttgtggatttagatataggccaagggtctataacagttcctggatgt atcgctgctacacctattgaactgcccattgatcctgtggaaggaattcctcttgagatg cctcttgtttatttttacggccatacaactcctagtaataatgtagatttatataagaca ctcgtgaatgagctggctcaaatgctggagactcaatttgctcgtaatgctgagtctcga gctgcaggcatggttatcaatactatgggttggatagaaggtactggctacgagttgctt cttcatgcaattgatacattcaaggccaatgttgtcctggttttgggtcaggaaaaactt ttcagcatgcttaaggctgtagcaaaaagtaagcctaatgtggatgttgtgaagcttcag aagtctggcggtgttgtatcaagaaatgcaaaatatcgtcagaagtctaggggttacagg ataagggagtacttctatggccttgcaaatgatctttccccgcattctaatattgcaaac ttcagtgatctgcttgtctatcgaattggcggtggtccacaggcaccaagatcggcttta ccaattggtgcagatcctattgctaacccactaagagtaacacctgtgaatattgaccgg gatttgcttcatatggttcttgctgtttcatatgccaaggagcctgatcaaattttgtct agtaatgtagcgggctttatttacatcactgacattgatattcagaggaagaaaatcaca taccttgcaccatcagctggggaattgccaagcaaatatcttattatgggaaccttgact tggcttgaaacttaa

DBGET integrated database retrieval system