Gossypium hirsutum (upland cotton): 107892913
Help
Entry
107892913 CDS
T04793
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03020
RNA polymerase
ghi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107892913
09124 Replication and repair
03420 Nucleotide excision repair
107892913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107892913
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107892913
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
107892913
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
107892913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HVSL
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
107892913
NCBI-ProteinID:
XP_040956440
LinkDB
All DBs
Position
D09:37034135..37036709
Genome browser
AA seq
298 aa
AA seq
DB search
METTTHRTSTSTTPLRCLFPPIPIPKRRRRCRLLSLRLLFQKRYWIDFNKWEVFINDDRT
RTFLSLEVVTGGLPEITKQIQAVNEVYKFYNLPEFYKDPRPHISLAWALGDVSGSLNKSF
VQLKLFLFRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPTATVTFMYEPKIHINEDLM
ESLTLEEKLSFVESSPTKVFDIDPNTQQVVVVDPGAYTYDNEVLKKAEAMGKPGLVEIYA
KEDSFIFTVESTGAIKASQLVLNAIEILKQKLDAVRLSEDTVEADDQFGELGAHMRGG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggagacgacgactcatcggacttcgacttcgaccactcccctacgctgtctcttcccg
ccaattccaatccccaaaaggaggagacgctgtcgtctcctctccctccgcctcctgttt
caaaagcggtattggattgattttaacaaatgggaggtttttatcaatgatgatcgaacg
cgcacctttctttcactcgaagtcgttacgggaggattacccgagataactaagcaaatt
caggctgttaacgaggtttacaagttttacaatcttcccgagttctataaggatccaagg
cctcatatatcattggcttgggcactaggtgacgttagtggttcccttaacaagtcgttt
gtacaactgaaattgtttcttttcagagggattattattgtgaagttacggcgagggcaa
gaactgaggctgagggcaattgcgaggaaagggatagggaaagatcacgccaaatggtca
cctactgcgacggtgacttttatgtatgaacctaagattcatatcaatgaagatttgatg
gaaagcttgacgcttgaagagaagctaagctttgttgagagtagtccaactaaagtcttt
gacattgacccaaatacccaacaggttgtggtggttgatccaggggcgtatacctatgac
aatgaggtgctaaagaaagctgaagctatgggcaagccaggtcttgtggagatatatgcc
aaagaagacagtttcatctttacagttgaatccactggtgcgatcaaagcttctcagttg
gttcttaatgctatagaaatcctgaaacagaagttggatgcagttcgcctgtctgaggat
actgtggaagctgatgatcagtttggtgaactaggtgcccatatgcgaggaggatga
DBGET
integrated database retrieval system
