KEGG   Gossypium hirsutum (upland cotton): 107898021
Entry
107898021         CDS       T04793                                 
Name
(RefSeq) DNA polymerase alpha subunit B isoform X1
  KO
K02321  DNA polymerase alpha subunit B
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03030  DNA replication
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    107898021
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ghi03032]
    107898021
DNA replication proteins [BR:ghi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase alpha / primase complex
    107898021
SSDB
Motif
Pfam: DNA_pol_E_B Pol_alpha_B_N PfEMP1_CIDRalpha1_dom CDC48_N
Other DBs
NCBI-GeneID: 107898021
NCBI-ProteinID: XP_016679073
UniProt: A0A1U8IRL7
LinkDB
Position
A05:complement(49868410..49874967)
AA seq 623 aa
MEEEIKAEFLKSGFTLDEEQEILKKCHTFCQDYRLEPSDLVSSWEIYYLNRQLDESVVKD
AEMDGFLGHLQNEQLGASAKKDPGLHMYSFKDVVMVLDAEDEDTKDVILGTPIDKYEKLQ
LDIYDSARKTNGNIYSSERKSKLVTPFGKRSNKFVVKFNIDNLPTIETANGIEEHYDLED
GIIKRVQPLKSSSLVVHQSGLEPGCRFMYDRIEDRFNAIENRIRKHAAALVASSLYEEPM
DPSVASQRSMFAVGMICCDGEGHLNDKSILLQSSVEHSRGQRVRLELNKLSHFSVFPGQI
VGIKGHNPSGHCLIASELVDSVPLSIAADADLPPTKKQALDEEIQATHLSSTPTETTMII
AAGPFTTTDNLLFEPLSELLAYATRNSPQLLILLGPFIDSEHPQIKKGTVDLSFDDIFQS
EVLRMVQDYLEYMGPNAQLVMVPSIRDANHDFVFPQPAFDLDSLNVRLQITSLNNPGIFE
ADQVMIGCCTVDILKHLSGEEMSRHSMDGQPNDRLSRLASHILSQQSFYPLYPPAEGVPM
DFSLASEVLHISSVPHLLILPSDIKYFVKVLPVGGTTEGEEEQMKRCVCINPGRLAKGEG
GGTFVELKYQGSSDKMNASIISI
NT seq 1872 nt   +upstreamnt  +downstreamnt
atggaagaggagatcaaagcagagttcttgaagagtgggtttactcttgacgaagaacaa
gagattctcaaaaaatgtcatacattttgtcaagattaccgtctcgagccttccgatctg
gtttcaagctgggagatttattatctcaatcgacaacttgatgaatctgttgtgaaggat
gcagagatggatggatttttagggcacctacagaatgaacaattaggggcgagtgctaaa
aaggatcctggtttgcatatgtactcttttaaagacgttgtcatggttcttgatgctgaa
gatgaagatacaaaagatgttattcttggaactccaatagacaaatatgagaaacttcag
ttggacatatatgactcggctcgtaaaacaaatgggaacatttattcttctgagagaaaa
tcaaaactagtgacaccgtttgggaaacgaagtaacaaatttgtggtcaaattcaacatt
gataatcttcctactatagagactgccaatggcattgaagaacattatgatcttgaggat
ggaattattaaaagggttcaacctttaaaaagctcttcattggtggtccaccaatcaggg
ctagaaccaggttgcaggttcatgtatgacaggattgaagacaggttcaatgcaattgaa
aaccgcatcagaaagcatgcagctgcacttgttgcatctagtctctacgaagaaccaatg
gatccatcagttgcttcgcagaggagcatgtttgctgtggggatgatctgctgtgatgga
gaaggtcatctaaatgataaatctatcttgttgcaaagcagtgttgagcattcgagaggg
caacgtgttcgtctagagttaaataaactgagtcacttttctgtttttccaggccagatt
gtaggcatcaagggtcacaatcctagtggccattgtttgatcgcatcagagctagtagat
tctgttcctttatccattgctgcagacgcagatttgcctcctacaaagaagcaagcttta
gatgaggagattcaggcaactcatctttcctccacgccaacagagaccacaatgattatt
gccgctggtccattcactactacagacaacttattatttgaacctctttcagaactgctt
gcctacgcaaccagaaactctccacagttgcttatactgttaggacctttcatcgattct
gaacatccacagatcaagaaaggaactgttgacttgagtttcgatgatatattccaatca
gaagttcttagaatggttcaagattatttggaatatatgggacccaatgctcagttggtt
atggttccttccatacgagatgctaatcatgattttgttttccctcagcctgctttcgat
ctcgattctctcaatgttaggcttcagataaccagtctcaataatccagggatttttgag
gcagatcaggtcatgataggttgctgtacggtagatattctcaaacatcttagtggggag
gagatgtcaagacattcaatggatggacaacctaatgatcggttgagcagacttgccagc
catattcttagccaacagagcttttatccactgtatccaccagctgaaggtgtcccaatg
gatttttcccttgcttctgaagttcttcatatatcctcagttccacatcttcttatctta
ccttcagacatcaagtactttgtcaaggtgttacctgtaggggggacaaccgaaggggaa
gaagaacaaatgaaaagatgtgtttgtattaacccgggaagactggctaagggagaaggc
ggcggcacgtttgtagagctaaaatatcaggggagttctgataagatgaatgcttcaatt
atcagcatatga

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