KEGG   Gossypium hirsutum (upland cotton): 107904697
Entry
107904697         CDS       T04793                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 12
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03020  RNA polymerase
ghi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107904697
  09124 Replication and repair
   03420 Nucleotide excision repair
    107904697
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ghi03021]
    107904697
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107904697
Transcription machinery [BR:ghi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     107904697
  RNA polymerase III system
   RNA polymerase III
     107904697
  RNA polymerase I system
   RNA polymerase I
     107904697
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      107904697
SSDB
Motif
Pfam: DNA_RNApol_7kD YjdM_Zn_Ribbon HypA DUF5816 zinc_ribbon_13 DUF1451 Prok-RING_1 OrfB_Zn_ribbon zinc_ribbon_10 FtrD-like zf-ribbon_3 A2L_zn_ribbon Zn-ribbon_8
Other DBs
NCBI-GeneID: 107904697
NCBI-ProteinID: XP_016686644
UniProt: A0A1U8JEE3
LinkDB
Position
D11:complement(187893..189820)
AA seq 51 aa
MDPQPEPVTYICGDCGQENTLKHGDVIQCRECGYRILYKKRTRRIVQYEAR
NT seq 156 nt   +upstreamnt  +downstreamnt
atggatccacaacctgaacctgttacctatatctgtggagactgtgggcaagagaacaca
ttgaagcatggagatgtgatacaatgccgggagtgtggttatcgcattctttacaagaag
cgaacccgaagaattgttcagtacgaagctcgctga

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