Gossypium hirsutum (upland cotton): 107909992
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Entry
107909992 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: ribosomal RNA small subunit methyltransferase
KO
K14191
18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:
2.1.1.183
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107909992
Enzymes [BR:
ghi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.183 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase
107909992
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
107909992
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RrnaAD
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_31
Methyltransf_23
PCMT
PPS_PS
DREV
CMAS
Methyltransf_2
Methyltransf_28
Motif
Other DBs
NCBI-GeneID:
107909992
NCBI-ProteinID:
XP_016693211
UniProt:
A0A1U8JSF3
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All DBs
Position
A07:complement(27261923..27263524)
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AA seq
349 aa
AA seq
DB search
MAGGKMKKDKQKGXESPSNHYQGGVTFHKSKGQHILKNPMLVDAIVQKAGIKPTDTILEI
GPGTGNLTKKLLETGKMVIAVELDPRMVLELQRRFQGTPFSNRLKVIQGDVLKTDLPYFD
ICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQREFAMRLVAQPGDNLYCRLSVNTQFYA
RVFHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPEVNHKEWDGFIRICFIRKNKTLGSIFK
QKNVLSLLEKNYKTLQALQGSQNVSLSGNDDMEIARLGDESMEMEDGMDDDMDMECDEAE
GEGEVSEFKNKVISVLKEGKFEEQRASKLSQESFLTLLSMFNKAGIHFS
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagggaagatgaagaaagataagcaaaaagggnccgagagcccctccaatcac
taccaaggtggtgtcactttccacaaatccaaaggccagcacatccttaagaaccctatg
ttggtcgacgctattgtacaaaaggccggcatcaaacccaccgataccatcctcgaaatc
ggtcccggtactggtaaccttaccaagaagcttcttgaaaccggtaaaatggtcatcgcc
gtcgaactcgatcctcgtatggtcctcgaacttcaacgccgctttcaaggcactcctttc
tctaatcgcttaaaggttattcaaggtgatgtactgaagacggatttgccctattttgat
atatgtgtggcgaatattccgtatcaaatatcttctcctcttacattcaagttactgttt
catcagcctgcttttaggtgtgctattattatgttccagagagaattcgcaatgcgactc
gttgctcagcctggtgataatctttactgtcggctttccgtcaatacccaattttatgct
cgggttttccatctcctcaaagtcgggaagaacaatttccggcctccacctaaggttgat
tcttctgtagtaaggatcgagccgaggaaaccacgccctgaagtgaatcataaggagtgg
gatgggtttataaggatttgtttcataaggaagaataagacactgggttccattttcaag
cagaaaaacgtactgtcactcttggagaagaactataagaccttgcaggcgctgcaaggc
tcacaaaatgtttctttgagtgggaatgatgatatggagattgcaagattaggggatgag
agtatggaaatggaagatggaatggatgatgacatggatatggaatgtgatgaagcagaa
ggagaaggagaagtgtctgagtttaaaaataaggttataagtgtgttgaaggaaggaaaa
tttgaggagcagagagcatccaagcttagtcaggaaagctttttaaccttactctctatg
ttcaacaaggctggcatacacttctcctga
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