Gossypium hirsutum (upland cotton): 107914002
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Entry
107914002 CDS
T04793
Name
(RefSeq) sphingosine kinase 1 isoform X1
KO
K04718
sphingosine kinase [EC:
2.7.1.91
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00600
Sphingolipid metabolism
ghi01100
Metabolic pathways
ghi04148
Efferocytosis
Module
ghi_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
107914002
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107914002
Enzymes [BR:
ghi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.91 sphingosine kinase
107914002
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GFIT
Motif
Pfam:
DAGK_cat
YegS_C
CERK_C
Motif
Other DBs
NCBI-GeneID:
107914002
NCBI-ProteinID:
XP_016698190
UniProt:
A0A1U8K6Q8
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Position
A05:complement(16432497..16436232)
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AA seq
485 aa
AA seq
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MDPENLSSFISDRVLVYGKVVPLTLTRDGKLRWNHDDRRCLNVEKEVLGFTFEGSRIRVN
VAVEKRDGILCFANMGGIARQSFVFEPLSEESLTLWSQKLRDYIDSFGRPKRLLIFVNPF
GGKKCATKIFVEDVRPCLEDADIQFTVIETKHQLHAKEVVKTLDLSKYDGIVCVSGDGIL
VEVINGLLEREDWSDAIKMPIGMVPAGTGNGMVKSLLDSAGEICSPSNAILAVIRGHTRS
LDVATISQGKTRFFSVLMLAWGLIADIDIESEKYRWMGSARIDFYALQRITYLRHYNGRV
SFVPAPGFEEYGEQTIYSGEPSCETRTSQQESLNTQQPGYLGSDVKLENMHWRTISGPFV
SIWLHNVPWGSEDVLAAPNAMFSDGYLDLIIVKDIPKLSLLSLLSKMNDGSHVHCPHVMY
LKVKAFVLEPGARIDDPMKEGIIDSDGELLARGNVTYKGNVKCSMAYDKLQITVDQGLAT
LFAPV
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggatccagagaacctctcatccttcatatcagaccgagtcctcgtctacgggaaagtg
gttcccctgacgctcaccagagacgggaagctccggtggaaccatgacgaccggcggtgc
ttgaacgttgagaaggaggttctcggattcaccttcgaaggttctagaatccgagtcaat
gtcgccgtcgaaaagagagatggaatactctgtttcgcgaacatgggaggtatcgcgagg
cagagttttgtgttcgagcctctctcagaggaatcgctcactctctggtctcagaagctt
cgtgattatattgattctttcggtaggccaaagagactactgatatttgtgaacccgttt
ggagggaagaaatgtgcaactaaaattttcgtagaagatgtaagaccttgccttgaagat
gctgatatacagtttactgtcatagaaactaaacatcagctgcatgctaaagaagttgtc
aaaaccttggatttatcaaaatatgatggaattgtttgtgttagtggcgatggaatcctt
gttgaggtgataaatggattacttgaaagagaagattggagtgatgcaataaagatgcct
ataggaatggttcctgctggaacgggaaatggcatggtgaagtctttgctggattcagct
ggtgaaatatgtagcccatctaatgccattcttgctgttatcagagggcatacacgttcg
ttggatgtagctactatctcgcaagggaaaactagattttttagtgtcttgatgcttgca
tggggtctgatagcagacattgacatcgaatctgaaaagtatagatggatggggagtgct
cgtattgatttctatgctcttcaacgtataacatatttaaggcattacaatggacgtgtt
tcttttgtgcctgctcctggctttgaagagtatggcgagcaaaccatttattctggtgaa
ccttcctgtgaaacacgcacaagtcaacaagagtcccttaacactcaacagcctgggtac
cttggatccgatgttaagttggagaacatgcattggaggactattagcggaccatttgtt
tcaatctggcttcataatgtaccgtggggaagtgaagatgtcctggctgcacccaatgca
atgttctcggacggttatttggacttgattatcgtaaaggacatcccgaaattatccttg
ctgtcattactatcaaaaatgaatgatgggagtcatgtccattgtccacacgttatgtac
cttaaggtgaaggcatttgtgttggagcctggtgctcgaatcgatgatccaatgaaggaa
gggatcatcgactcagatggtgagcttcttgccaggggaaatgtaacatacaagggtaat
gtaaagtgctctatggcgtacgataagcttcaaataaccgtggatcaaggtttagctact
ttgtttgcacctgtatag
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