Gossypium hirsutum (upland cotton): 107927589
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Entry
107927589 CDS
T04793
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107927589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107927589
Enzymes [BR:
ghi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107927589
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
107927589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
107927589
NCBI-ProteinID:
XP_016714180
UniProt:
A0A1U8LI21
LinkDB
All DBs
Position
D04:complement(2709298..2732532)
Genome browser
AA seq
1158 aa
AA seq
DB search
MGLKQEDILNNNSKNLNVSEIPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFN
YFVNTGIKKIVRANDRIVSDIDPSIYLRFKDVRIGEPSMTVDGITEKINPHACRLSEMTY
AAPILVNIEYIQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLQGKDEAELARLGECPLDP
GGYFVIKGTEKVILIQEQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYL
LLNQFVKKIPIMVVMKAMGMESDQEVVQMLGRDPRFSALLLPSIEECAGIGIYTKEQALA
YLDTKAKRPLYASSASDQDGRAFCILRDVFIANVPVRCNNFRPKCLYVAVMLRRMMEAIL
NKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTTLVQVKKSIDSVLSKTSRSSALDPSQF
LRRMEFITTGLERTLSTGNFDIQRFRMHRKGMTQVLARLSFIGTLGFMTKVSPQFEKSRK
VSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLVSLCYCLGVEDLE
LLSGEELHTPNSFLVMLNGLILGKHRRPQHFANALRKLRRAGKVGEFVSVFVNEKQRCVY
IASDGGRVCRPLVIADKGISRIKEHHMKELLDGVRTFDDFLSDGLIEYLDVNEENNALIA
LYEGEATPETTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCR
MDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVISYSGYDIEDAIVMNKSSLDR
GFGRCIVMKKSSNVIQKYENGATDRILRPQRTGPGSEKMQILDDDGIASPGEIIRPNDIL
LNKEVPIHTRGTRVSSDSLPDSAYKPARQSYKGPEGESCVMDRVSLSTDRNGNLSIKFLI
RHTRRPELGDKFSSRHGQKGVCGIIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIE
LLGGKAGLSCGRFHYGSAFGEPSGHADKVETISETLVKHGFCYNGKDFIYSGITGCPLQA
YIFMGPIYYQKLKHMVLDKMHARGNGPRVMLTRQPTEGRARKGGLRVGEMERDCLIAYGA
SMLIFERLMVSSDPFEVQVCRKCGLLGYYSHKLKTGICSSCKNGDDVSTMQLPYACKLLI
QELQSMNIVPRLKLAEAN
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgggtcttaagcaagaagatatactcaataacaactccaagaacttaaatgtttccgag
ataccagtggacaagcaaaagcttgctgctccaataaaatctgctgttgacaagtttcaa
cttctccctgagtttttaaaggttagagggttagtgaagcagcacttggattcatttaat
tatttcgttaataccggaataaagaagattgttcgtgccaatgaccggattgtatccgat
attgaccctagtatttacctcaggtttaaagatgttagaattggtgagccctccatgact
gtggatgggattactgaaaaaattaatccccatgcttgccggttgtcggaaatgacgtat
gctgcaccgatattggttaatatagagtacattcaagggagtcatgggcagaaaactaga
ctagaaaagaatgatcttgttattggaagaatgcccatcatgttaaggagttgctgctgt
gtgttacaaggaaaagatgaagccgaacttgcaaggcttggtgagtgtcctcttgatcct
ggagggtattttgtgattaaaggaacggagaaggtgattttaatacaggaacaactctcc
aagaacaggataattattgatgcagataagaagggaaatataaatgcatctgtgacaagc
agttcagaggcaacaaaaagcaaaacagttattcagatggagaaagagaagatatatttg
ttactcaaccaatttgtgaaaaagatccctattatggtggtcatgaaagcaatggggatg
gagagtgatcaagaggtggtgcagatgcttgggagagatcctcgtttcagtgcccttctt
ttaccttctatagaggaatgtgcaggtattggcatatataccaaggaacaagcattggcc
taccttgatacgaaggcaaagaggcctttatatgctagttcggcatctgaccaggatggg
agagctttttgtattcttcgagatgtgtttattgccaatgttccagtgcgctgcaataat
tttcgccctaaatgtttgtatgttgcggtaatgctgagaaggatgatggaagcaatctta
aataaggatgctatggatgacaaggattatgtggggaacaagcgtcttgagctatcagga
caattaatctctcttctttttgaggatctattcaagaccacgcttgtccaggttaagaag
tcgattgatagtgtcctatcaaagaccagcagatctagtgcattagacccttctcagttt
ttgcgtcgtatggagttcatcactacggggcttgaaaggaccctttctactggaaacttt
gatatccagcggttcagaatgcacagaaaaggcatgacacaggtcttggcaaggttgtcc
tttattggaactttgggctttatgacaaaagtctcaccgcagtttgagaaatctcggaaa
gtaagtggaccgagggccttacaacctagtcagtggggaatgctttgcccttgtgatact
ccagaaggtgaagcttgtggtctggttaaaaacttggctctaatgactcatgttactact
gacgaggatgagggtccattggtttctttgtgttattgcttgggtgttgaggacttggag
ctactatctggagaagagcttcatacgccaaattcattcctggttatgttgaacgggctc
attcttggaaaacatagaaggccacagcattttgctaatgctctgagaaagctgcgaaga
gctggcaaagttggcgagtttgtgagcgtcttcgtaaatgagaagcagcggtgtgtttac
attgcttctgatggtggtcgagtttgtcgaccattggtaatagctgacaagggaatatca
aggatcaaagaacaccatatgaaggagttgttggatggagtgcgtacttttgatgacttt
ttaagtgatggattgattgagtatcttgacgtcaacgaggagaacaatgctctgattgct
ttgtatgagggagaggcaacacctgaaacaacccatattgagatagagcctttcacaata
ttaggtgttattgcggggttgattccttatcctcatcataatcaatcgccaagaaatacc
tatcagtgtgcaatggggaagcaagcaatgggaaatattgcatataaccagttgtgccgg
atggacacattactttatctattggtgtatcctcagcgaccattattgacaacaaggaca
attgaactggtcggatatgataagcttggagctggtcagaatgcaactgttgcagtcatc
agttatagtggttatgacatagaggatgcaattgtcatgaacaagtcttctctagaccgt
ggttttggtcgttgtattgtcatgaaaaagtcttctaacgttattcaaaaatatgaaaat
ggtgcaaccgacagaattcttaggccacagagaactggacctggttcagagaaaatgcag
atcttagatgatgatggaattgcttctcctggggagattattagaccaaatgatatcctc
cttaataaggaggtccctattcatacaagagggactcgcgtatcttcagactctcttcca
gatagtgcctacaaacctgcaaggcaatcatacaaaggtcctgaaggagagtcttgtgtg
atggatagagtttctcttagcactgataggaacggcaatctatcaataaaatttttaata
cgtcatactcgtagacctgagcttggtgacaaatttagtagcagacatggccagaaaggt
gtctgtggtattattattcaacaggaagatttccccttttctgagcgtggcatttgtcct
gatttaattatgaatcctcatggttttccaagtcgaatgactgtaggcaagatgatagag
cttcttggtggcaaagctggactttcatgtggtaggttccattatggtagtgcctttggc
gagcctagtggtcatgcggataaggttgaaaccataagtgaaactcttgtcaagcacggt
ttttgctacaacggcaaggacttcatttattcaggtatcactggttgtccgctgcaagca
tatatttttatgggaccaatttactaccagaagttaaagcatatggtccttgataaaatg
catgctagaggtaatgggcctcgagttatgcttacaagacagcctacagaagggagagcc
cgaaaaggagggttacgagtaggtgaaatggaacgtgattgtctaattgcttatggtgcc
agtatgttgatttttgagcgcctgatggtatctagcgatccttttgaagtccaggtctgc
agaaaatgtggattgttaggatactacagccataagctgaaaacagggatttgttcttca
tgtaaaaatggagatgatgtttcaactatgcaactaccatacgcttgcaagcttttaatc
caggaactccagtcaatgaatatcgttccacgtttgaaattagcagaggcgaattaa
DBGET
integrated database retrieval system
