Gossypium hirsutum (upland cotton): 107927590
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Entry
107927590 CDS
T04793
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107927590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107927590
Enzymes [BR:
ghi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107927590
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
107927590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
107927590
NCBI-ProteinID:
XP_040970469
LinkDB
All DBs
Position
A05:108637993..108661092
Genome browser
AA seq
1158 aa
AA seq
DB search
MGLKQEDILNNNSKNLNVSEIPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFN
YFVNTGIKKIVRANDRVVSDVDPSIYLRFKDVRIGEPSMTVDGITEKINPHACRLSEMTY
AAPILVNIEYIQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLHGKDEAELARLGECPLDP
GGYFVIKGTEKVILIQEQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYL
LLNQFVKKIPIMVVMKAMGMESDQEVVQMLGRDPRFSALLLPSIEECAGIGIYTKEQALA
YLDTKAKRPLYASSASEQDGRAFSILRDVFIANVPVRCNNFRPKCLYVAVMLRRMMEAIL
NKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTTLAQVKKSIDGVLSKTSRSSALDPSQF
LRRMEFITAGLERTLSTGNFDIQRFRMHRKGMTQVLARLSFIGTLGFMTKVSPQFEKSRK
VSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDDDEGPLVSLCYCLGVEDLE
LLSGEELHTPNSFLVMLNGLILGKHRRPQHFANALRKLRRAGKVGEFVSVFVNEKQRCVY
IASDGGRVCRPLVIADKGISRIKEHHMKELLDGVRTFDDFLSDGLIEYLDVNEENNALIA
LYEGEATPETTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCR
MDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVISYSGYDIEDAIVMNKSSLDR
GFGRCIVMKKSSNVIQKYENGATDRILRPQRTGPGSEKMQILDDDGIASPGEIIRPNDSL
LNKEVPIHTRGTRVSSDSLPDSAYKPARQSYKGPEGESCVVDRVSLSTDRNGNLSVKFLI
RHTRRPELGDKFSSRHGQKGVCGIIIQQEDFPFSEGGICPDLIMNPHGFPSRMTVGKMIE
LLGGKAGVSCGRFHYGSAFGEPSGHADKVETISETLVKHGFCYNGKDFIYSGITGCPLQA
YIFMGPIYYQKLKHMVLDKMHARGNGPRVMLTRQPTEGRARKGGLRVGEMERDCLIAYGA
SMLIFERLMVSSDPFEVQVCRKCGLLGYYSHKLKTGICSSCKNGDDVSTMQLPYACKLLI
QELQSMNIVPRLKLAEAN
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgggtcttaagcaagaagatatactcaataacaactccaagaacttaaatgtttccgag
ataccagtggacaagcaaaagcttgctgctccaataaaatctgctgttgacaagtttcaa
cttctccctgagtttttaaaggttagagggttagtgaagcagcacttggattcatttaat
tatttcgttaataccggaataaagaagattgttcgtgccaatgaccgggttgtatccgat
gttgaccctagtatttacctcaggtttaaagatgttagaattggtgagccctccatgact
gttgatgggattactgaaaaaattaatccccatgcgtgccggttgtcggaaatgacgtat
gctgcaccgatattggttaatatagagtacattcaagggagtcatgggcagaaaactaga
ctagaaaagaatgatcttgttattggaagaatgcccatcatgttaaggagttgctgctgt
gtgttacatggaaaagatgaagctgaacttgcgaggcttggtgagtgtcctcttgatcct
ggagggtattttgtcattaaaggaacggagaaggtgattttaatacaggaacaactctcc
aagaacaggataattattgatgcagataagaagggaaatataaatgcatctgtgacaagc
agttcggaggcaacaaaaagcaaaacagttattcagatggagaaagagaagatatatttg
ttactcaaccaatttgtgaaaaagatccctattatggtggtcatgaaagcaatggggatg
gagagtgatcaagaggtggtgcagatgcttgggagagatcctcgtttcagtgccctcctt
ttaccttctatagaggaatgtgctggtattggcatatataccaaggaacaagcattggcc
taccttgatacgaaggcgaaaaggcctttatatgctagttcggcatctgaacaggatggg
agagctttttctattcttcgagatgtgtttattgccaatgttccagtgcgctgcaataat
tttcgtccaaaatgtttgtatgttgcggtaatgctgagaaggatgatggaagcaatctta
aataaggatgctatggatgacaaggattatgtggggaacaagcgtcttgagctatcagga
caattaatctctcttctttttgaggatctattcaagaccacgcttgcccaggttaagaag
tcgattgatggtgtcctatcaaagaccagcagatctagtgcattagacccttctcagttt
ttgcgtcgtatggagttcatcactgcagggcttgaaaggaccctttctactggaaacttt
gatatccagcggttcagaatgcacagaaaaggcatgacacaggtcttggcaaggttgtcc
tttattggaactctgggctttatgacaaaagtctcaccgcagtttgagaaatctcggaaa
gtaagtggaccgagggccttacaacctagtcagtggggaatgctttgcccttgtgatact
ccagaaggtgaagcttgtggtctggttaaaaacttggctctaatgactcatgttactact
gacgatgatgagggtccattggtttctttgtgttattgcttgggtgttgaggacttggag
ctactatctggagaagagcttcatacgccaaattcattcctggttatgttgaatgggctc
attcttggcaaacatagaaggccacagcattttgctaatgctctgagaaagctgcgaaga
gctggcaaagttggcgagtttgtgagcgtcttcgtaaatgagaagcagcggtgtgtttac
attgcttctgatgggggtcgagtttgtcgaccattggtaatagctgacaagggaatatca
aggatcaaagaacaccatatgaaggagttgttggatggagtgcgtacttttgatgacttt
ttaagtgatggattgattgagtatcttgacgtcaacgaggagaacaatgctctgattgct
ttgtatgagggagaggcaacacctgaaacaacccatattgagatagagcctttcacaatt
ttaggtgttattgcggggttgattccttatcctcatcataatcaatcaccaagaaatacc
tatcagtgtgcaatggggaagcaagcaatgggaaatattgcatataaccagttgtgccgg
atggacacattactttatctattggtgtatcctcagcggccattattgacaacaaggaca
attgaactggtcggatatgataagcttggagctggtcagaatgcaactgttgcagtcatc
agttatagtggttatgacatagaggatgcaattgtcatgaacaagtcttctctagaccgt
ggttttggtcgttgtattgtcatgaaaaagtcttctaacgttattcaaaaatatgaaaat
ggtgcaaccgacagaattcttaggccacagagaaccggacctggttcagagaaaatgcag
atattagatgatgatggaattgcttctcctggggagattattagaccaaatgatagcctc
cttaataaggaggtccctattcatacaagagggactcgcgtatcttcagattctcttcca
gatagtgcctataaacctgcaaggcaatcatacaaaggtcctgaaggagagtcttgtgtg
gtggatagagtttctcttagcactgataggaacggcaatctatcagtaaaatttttaata
cgtcatactcgtagacctgagcttggtgacaaatttagtagcagacatggccagaaaggt
gtttgtggtattatcattcaacaggaagatttccccttttctgagggtggcatttgtcct
gatttaattatgaatcctcatggttttccaagtcgaatgactgtaggcaagatgatagag
cttcttggtggcaaagctggagtttcatgtggtaggttccattatggtagtgcctttggc
gagcctagtggtcatgcggataaggttgaaactataagtgagactcttgtcaagcacggt
ttttgctacaacggcaaggacttcatttattcaggtatcactggttgtccgctgcaagca
tatatttttatgggaccaatttactaccagaagttaaagcatatggtccttgataaaatg
catgctagaggtaatgggcctcgagttatgcttactagacagcctacagaagggagagcc
cgaaaaggagggttacgagtaggtgaaatggaacgtgattgtctaattgcttatggtgcc
agtatgttgatttttgagcgcctgatggtatccagcgatccttttgaagtccaggtctgc
agaaaatgtggattgttaggatactacagccataagctgaaaacagggatttgttcttca
tgtaaaaatggagatgatgtttcaaccatgcaactaccatacgcttgcaagcttttaatc
caggaactccagtcaatgaatatcgttccgcgtttgaaattagcggaggcgaattaa
DBGET
integrated database retrieval system
