Gossypium hirsutum (upland cotton): 107928099
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Entry
107928099 CDS
T04793
Name
(RefSeq) beta-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00052
Galactose metabolism
ghi00511
Other glycan degradation
ghi00600
Sphingolipid metabolism
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
107928099
09103 Lipid metabolism
00600 Sphingolipid metabolism
107928099
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
107928099
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
107928099
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
Motif
Other DBs
NCBI-GeneID:
107928099
NCBI-ProteinID:
XP_016714754
UniProt:
A0A1U8LNK0
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Position
A06:complement(124209197..124220168)
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AA seq
1114 aa
AA seq
DB search
MASLILSQLVFPSENGYKVWEDQSFIKWRKRDPHVTLHCHESVEGSLKYWYERNKVDLSV
SKSAVWNDDAVQSALDSAAFWVKGLPFVKSLSGYWKFLLASNPAAVPKNFYESAFQDSDW
ETLPVPSNWQMHGYDRPIYTNIVYPFPLDPPHVPTDNPTGCYRTYFHIPKEWKGRRILLH
FEAVDSAFCAWVNGVPIGYSQDSRLPAEFEITDYCYSCDSDKKNVLSVQVFRWSDGSYLE
DQDHWWLSGIHRDVLLLSKPQVFIADYFFKSNLADNFSYADIQLEVKIDCLRETSKDIVL
TDFIIEAALYDAGSWYNCDGNVDLLSSNVANIELNRFPPQTLGFHGYMLKGKLEKPKLWS
AEHPNLYTLVIILKDASGKIVDCESCLVGIRQVSKAPKQLLVNGHPVVIRGVNRHEHHPR
LGKTNIEACMVKDLVVMKQNNINAVRNSHYPQHPRWYELCDLFGMYMIDEANIETHGFDL
SGHLKHPTQEPSWAAAMMDRVIGMVERDKNHACIFSWSLGNEAGYGPNHSASAGWIRGRD
TSRVVHYEGGGSRTPSTDIVCPMYMRVWDIVKIAKDPNEARPLILCEYSHAMGNSCGNIH
EYWEAIDNIFGLQGGFIWDWVDQALLKDNGNGSKYWAYGGDFGDSPNDLNFCLNGITWPD
RTPHPTLHEVKYVYQPIKVYLRESTVKIKNTNFYETTEGVVFEWAVLGDGSELGCGILSL
PVIEPQSSYDIEWKSGPWYPLWASSDAEEIFLTITTKLLHSKRWVEAGHVVSSTQVQLPS
KRDIVPHIIKTKDDVLSTEILGDNIIISQSKLWEITFNTKTGSLDSWKVEGVPIMKNGLF
PCFWRAPTDNDKGGGPSSYQAKWKAACIDEIVFLTESYSIQNKTDNVVKIAVVYLGFIKG
EDGTLDEPKKATALFKVDMLYTIHASGDIVIESNVKPSSGLPPLPRVGVEFHLEKSVDQV
KWYGRGPFECYPDRKAAANVGVYEQSVEGMHVPYIVPGESGGRADVRWVTFQNKDGCGIY
ASTYGKSPPMQLNASYFSTAELDRAVRNEELIKGDFIEVHLDHKHMGIGGDDSWTPCVHE
NYLVPAVPYSFSIRLCPVTSATSGQNLYRSQLQN
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttgatattaagtcaacttgtttttccatcagaaaatggttacaaagtgtgg
gaagatcaatcttttattaagtggagaaaaagggaccctcatgttactttgcattgccat
gaatctgttgaaggatctcttaaatactggtatgaacgcaataaagtggacctttcagta
tccaaatcggcagtttggaatgatgatgctgttcagagtgcacttgacagtgcggctttt
tgggtcaaaggcttgcctttcgtcaagtctttgtctggttattggaaatttttattggct
tccaatcctgctgctgttccgaaaaatttctatgaaagtgcatttcaggattccgattgg
gaaactttgccggttccttccaattggcaaatgcatggatatgatcggcctatttatacc
aacattgtgtatccgtttccgcttgatcctcctcatgttcctacagataaccctacaggc
tgttacaggacatactttcacattcctaaagaatggaagggtcgccggattttgttgcac
ttcgaagctgttgattctgccttctgtgcttgggtaaacggagtccctattggatacagt
caggatagtagattgcctgctgagtttgaaataacagattattgctattcatgtgactcg
gacaagaagaacgttctatccgttcaagtatttaggtggagtgatggatcttaccttgaa
gatcaagatcattggtggttatccggtattcaccgtgatgtgcttctcctttctaaacca
caggtcttcattgcagattactttttcaaatcaaaccttgctgacaacttttcttatgca
gatatacagcttgaagtgaaaatagattgcttgagagaaacatctaaagatatagtgctt
acggactttatcatagaagctgcattatatgatgctgggagctggtacaactgtgatgga
aatgttgatctgctgtcatcgaatgtggctaacatagagctcaaccgctttccccctcaa
actctaggatttcatggttatatgcttaaggggaaactagaaaagcccaagttatggtca
gcagaacatccaaatttgtacacactggttatcatacttaaggatgcatctggcaaaata
gtcgactgtgaatcatgcctagttggtataagacaagtatcgaaagccccaaagcagcta
cttgttaacgggcatcctgttgtaataagaggtgtgaacaggcatgagcatcatccgcgt
ttggggaagacaaacatagaggcttgcatggttaaggatttggttgtaatgaagcaaaac
aatatcaatgctgtgagaaacagccactatcctcaacatccccgttggtatgagttgtgt
gacctgtttggaatgtatatgatagatgaagccaatattgaaacacatggttttgatctt
tctggacatctgaagcatcctactcaggaacctagttgggctgctgcgatgatggaccgt
gttataggcatggttgaaagggacaaaaatcatgcatgcattttttcgtggtccttggga
aatgaggctggatatggacctaatcattctgcttcagctggatggattcgtgggagagat
acttcacgagtagtacattatgaaggtggtggatctagaaccccatccaccgatattgta
tgcccaatgtatatgcgtgtatgggacatagtgaagattgcaaaagatccaaatgaagct
cgtcctttgatattgtgcgagtattcacatgccatgggaaacagctgtggaaatatacat
gaatattgggaagcaattgataacatttttggccttcaaggtggctttatatgggattgg
gttgaccaggccctattgaaggacaatggaaatggtagcaaatactgggcttatggtggt
gactttggggattctcccaatgatttaaacttctgcttgaatggcattacatggccagat
cgaactcctcatcccaccttacacgaggttaagtatgtctatcaacccatcaaggtttat
ctaagggaaagcacggttaagataaagaacactaatttttatgagacaacagaaggagtg
gtgtttgaatgggctgttcttggggatggcagtgaacttggatgtggaattctctccctt
cctgtgattgaacctcagagcagctatgatatcgaatggaagtctggcccatggtatcct
ctatgggcttcctcagatgccgaagaaatatttttaacaatcactactaaacttttgcac
tccaagaggtgggtggaagccggtcatgtggtttcatcgacacaagtccagttgccttcc
aaaagagatattgtacctcatatcatcaaaacaaaagacgatgtcctttccaccgaaatt
cttggggataatatcattattagccagtcaaagttgtgggagattacatttaatacaaaa
accggaagtctcgatagttggaaggttgaaggtgtccctataatgaaaaatggcctgttc
ccatgcttttggcgagcaccaacagacaatgacaaagggggaggtccgagcagttatcag
gctaagtggaaagctgcctgcattgatgagatagtttttcttactgaaagctattccata
caaaataagacagacaatgttgtgaaaatagcggttgtttaccttggtttcattaagggt
gaggatggcactttagatgagccaaaaaaagcaactgctttattcaaagttgacatgctt
tacacaatccatgcgtccggtgacatcgtaattgaatccaatgtaaaaccaagttctggt
cttcctcctttaccacgtgttggagttgaattccacttggaaaagtcggtggaccaagtg
aaatggtatggaagagggccatttgagtgttacccagatcgaaaagcagcagcaaatgtt
ggggtttatgagcaatctgtagaagggatgcatgttccttatatagttccaggggagtcc
ggaggtagagcggatgtcagatgggtgacatttcaaaacaaggatggctgtggaatttat
gcttcaacatacggaaaatctccacctatgcaattaaatgcaagttattttagcaccgct
gagcttgatcgggcagtgcgcaatgaagaacttatcaaaggggatttcattgaggtccat
cttgaccacaagcacatgggtatcggtggagatgatagctggacaccctgcgtacacgag
aactatctggttccagccgtgccgtactcgttctcaatccggttatgtcccgtaacttca
gctacttctggccaaaatctctacaggtcccaacttcaaaactga
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