Gossypium hirsutum (upland cotton): 107931041
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Entry
107931041 CDS
T04793
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107931041
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107931041
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107931041
03036 Chromosome and associated proteins [BR:
ghi03036
]
107931041
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107931041
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107931041
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107931041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
HEAT_EZ
Vac14_Fab1_bd
PDS5
Htt_N-HEAT_1
Adaptin_N
CLASP_N
Cnd1
Motif
Other DBs
NCBI-GeneID:
107931041
NCBI-ProteinID:
XP_016718304
UniProt:
A0A1U8LYH3
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All DBs
Position
A12:complement(108305837..108312258)
Genome browser
AA seq
588 aa
AA seq
DB search
MAMIDEPLYPIAVLIDELKNEDIQLRLNSIRKLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHANVLLPPLETLCIVEETCVRDKAVESLCRIGAQMREQ
DLVEFFIPLLKRLAAGEWFTARVSSCGLFHIAYPSAPEALKTELRTLYGQLCQDDMPMVR
RSAATNLGKFAATVEAPHLKVDIMSMFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRSDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNSELAIQNILPCVKELSTDSSQHVRSALASVIMGMAPILGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAANNVKRLTEEFGPDWAMQHIVPQV
LDMINNPHYLYRMTILHAVSLLAPVMGKDITCSKLLPVVINASKDRVPNIKFNVAKVLQS
LIPIVDQSVVEKTIRPCLVELSEDPDVDVRYFATQALQSSDQQMMMSS
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgatcgacgagcctttgtatcccattgcggtgttgatcgatgagctaaagaac
gaagatatacagcttcgtttgaactcgatccgtaagctttctacgattgcacgtgccctt
ggtgaagaaaggactcgaaaagaattgattccttttcttagtgagaacaatgatgacgat
gatgaagttctccttgccatggctgaagaattgggagtttttattccttatgttggaggt
gtggaacatgctaatgttttgttgcctccgttggagactctttgcattgttgaggaaact
tgtgtgagggataaggctgttgagtcgttgtgtagaattggtgctcaaatgagagagcag
gacttggttgagttctttattccactgttgaagagattggctgctggtgagtggtttaca
gctcgagtttcctcttgtggattgtttcatattgcatacccaagtgccccagaggcactg
aaaactgaattaagaacattatacggtcaactttgccaagatgacatgcccatggttagg
agatctgctgcgacaaatcttggaaaatttgctgctactgtagaagcacctcatttgaag
gtggacattatgtctatgtttgatgatttgacgcaggatgatcaagattctgtccgattg
ttagctgttgagggctgtgcagctcttggaaagttgttggaaccccaagattgtgtcgct
cacattctccctgtcatagttaatttctcacaggacaaatcttggcgtgtccgttacatg
gtcgcaaatcagttgtatgagctgtgtgaagctgttggtcctgagcctactaggtcggac
ctagtacctgcatatgttcgcctacttcgtgataatgaagctgaagtccggatagctgct
gctgggaaagtaactaaattttgccgaattctgaattcagaattagcaattcagaacatt
cttccttgtgtcaaggaattatcaacagattcgtcccaacatgtccgttctgctttggct
tcagttataatgggaatggcacccattttggggaaggatgcgaccatagaacaattgctt
cctatatttctttctcttctaaaagatgaatttccagatgtccgactgaatatcattagc
aagcttgatcaagtcaaccaggtaattggaattgatttgctgtcccagtccctattgcct
gcaattgtggagctcgcagaggatagacactggagggttcggcttgcaataatagaatac
atacctttattggcaagccaattgggtgttggcttcttcgatgacaaacttggtgcactc
tgcatgcaatggttaaaagataaggtttattctatacgtgatgctgctgctaataacgtg
aagcgcctcacggaagaatttggacctgattgggcaatgcagcatatagttccacaggtt
ttggacatgataaacaacccgcattatctatatcggatgaccattctacatgcggtttct
ctacttgcccctgttatgggaaaggatattacttgttcaaaacttctgcccgtggttatt
aatgcttctaaagatagggttccgaacatcaaatttaatgtcgccaaggtgttgcagtca
cttatccctattgttgatcaatctgtggtggagaagacaattcggccatgcctagttgaa
ttaagtgaggatccagatgttgatgtcaggtatttcgccacccaagctctacaatcaagt
gatcaacaaatgatgatgtctagctag
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