Gossypium hirsutum (upland cotton): 107940316
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Entry
107940316 CDS
T04793
Name
(RefSeq) phosphatidate phosphatase PAH2 isoform X1
KO
K15728
phosphatidate phosphatase LPIN [EC:
3.1.3.4
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00561
Glycerolipid metabolism
ghi00564
Glycerophospholipid metabolism
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Module
ghi_M00089
Triacylglycerol biosynthesis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09103 Lipid metabolism
00561 Glycerolipid metabolism
107940316
00564 Glycerophospholipid metabolism
107940316
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107940316
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.4 phosphatidate phosphatase
107940316
Protein phosphatases and associated proteins [BR:
ghi01009
]
HAD phosphatases
Other HAD phosphatases
107940316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LNS2
Lipin_N
Lipin_mid
APP1_cat
Motif
Other DBs
NCBI-GeneID:
107940316
NCBI-ProteinID:
XP_040970733
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All DBs
Position
A06:1699637..1706823
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AA seq
1140 aa
AA seq
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MYAVGRLGSYISRGVYTVSGPFHPFGGAVDIIVVEQPDGTFKTSPWYVRFGKFQGVLKTR
EKVVSICVNGIEANFHMFLDHKGEAYFLREVDGEEGESEGVPFPFPSGYDTDEPMSVNRM
PMKSKSCNYDADRSNSAGDVDVSNGKILARTTSRRSRIFGLVFGRRSMKEDGYQEAIGAA
DVMRLDPLERAEIAADLLEVKWSTNLISNGSNTNGSGLPSTNDALDDKGSEEHTPITREE
NQFQSSVHDEEGKNNVEENQFHSSVHDEENGVGHQTLLEETECCNEQKVSSHSGLENVEY
SVEESSIQVSYLGLEQQLDEPSSLGEGFMEDKSKVIVNNSVSIDDQSVVNSDHNENDMGA
VLDMSGPDLHCQHNFEEFTDKRFDEEPGGTERNVVLPVLGNSNKEVVPESLQPFVYSKMS
ESSVITSDGSSEQTHQIMSVSDVGNGKLCVHAETLVTTTALVPEVMVLKQTEDMELDSEG
EITVSESCSQMASVDPVIGLEEMKLHSFHTSSTISDLGDQAEDEKNTDDVVHCSLESVDD
SQNFYHDRDPKRSIPPSESSDDEQFLFSDLDELKLCEPDSVNKDLHPSACIENEGNGLCN
VHNESYLNPDNFVQENPSNDLEDSVGKSRTISNPISISRNHRVAGENNGLQVESLPNMWS
LDAKFDANNHRPVSHSMDSSSGTMKWTSSTKDDMSCKRLDADQEQPLEHERSSSDESETS
GKLKNTLYNPAVEISLCKHLLYEGMGAEAACEVFDAEKLDSKKISSLGAAVVKNDKLVVR
IGGHYFPWDEAAPIILGMVAFGSEKIFEPKGMIPVDRVEKSIEGDPSKDVSRSGSWRLWP
FSLKRSRSRKAVQLAPADTRDLDAEIAAEVTAAIDDDKNLLKSKQMKKMIRAITPTSEQL
ASLNLKDGMNHITFTFSTPMLGKQQVDARIYLWKWNTRVVISDVDGTITKSDVLGQFMPL
VGIDWSQTGVAHLFSAIKENGYQLLFLSARAIAQAYITRQFLVNLKQDGKALPDGPIVIS
PDGLFPSLYREVIRRAPHEFKIACLEEIKALFPSDCNPFYAGFGNRDTDEISYVKVGIPI
GKIFIINPKGEVAVNRRVDTKSYTSLHALVHGMFPPTTSSEQEDFNSWNFWKLPPPVFDI
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtatgctgtggggagactaggtagctatatatctcgtggtgtttatactgtgtctggt
ccatttcatccctttggtggtgctgttgatataattgtagttgaacaacctgatgggacc
tttaaaacatcaccttggtatgttcggtttggtaaatttcaaggggttttaaagacaagg
gaaaaggttgttagtatctgtgttaatggaatcgaagcgaatttccatatgtttcttgat
cataaaggggaagcatattttttaagggaagtagatggtgaagaaggggaatctgaaggt
gttccgtttccttttccttctggatatgatacggatgagcctatgtctgttaatagaatg
ccaatgaagtctaaaagttgtaactatgatgctgataggtctaattccgcgggtgatgtt
gatgtgagtaatgggaagattttggctaggactacttctcggaggtcacggatatttgga
cttgtttttggacggaggtcgatgaaggaggatggttaccaggaagctataggtgctgct
gatgtaatgaggttagatcctttggagcgtgctgaaattgctgctgacttgttggaggtg
aagtggtctactaatcttatatctaatggatcaaatactaatggttctggattaccttcc
acgaatgatgcattggatgataaaggctccgaagagcatacaccgattactcgtgaagaa
aaccagtttcaatcttcagtacatgatgaggagggaaagaataatgttgaagaaaaccag
tttcactcttcagtacatgatgaggaaaatggtgttggtcaccagacattactagaggaa
actgaatgctgcaatgagcaaaaggtcagttctcattccggccttgagaatgtggagtat
tctgtcgaggaatctagcatacaagtgtcttatctaggtttggagcaacaacttgatgaa
ccctcatcattaggtgaaggttttatggaagataaaagcaaagtaatagtcaataattcg
gtaagtattgatgaccaaagtgttgtaaattctgatcacaatgagaacgacatgggtgct
gtcttagacatgagtggtcctgatctacattgtcaacataactttgaagaatttacggac
aagcggtttgatgaagaacccggtggtactgaaaggaatgttgttttaccagtccttggg
aattccaataaggaggttgttccagagagtcttcaaccatttgtttactccaaaatgtca
gagagctcggtaataacttcggatggttcaagtgaacaaactcatcaaataatgagcgtt
tccgatgtaggaaatgggaaattatgtgttcatgctgaaacactggttacaacgactgcg
ctagtgccagaggttatggttcttaagcaaacggaggacatggagttggattctgaaggg
gaaataacagtctcggaatcctgctctcaaatggctagtgttgaccctgtaattggttta
gaagaaatgaagttacatagctttcacacctcttccaccatcagtgatttgggtgatcaa
gctgaagatgagaaaaatactgacgatgttgtccattgttctttggagtccgttgatgat
tctcaaaacttttatcatgatcgtgaccccaagagaagtattccaccatcagagagttct
gatgatgaacaattcctttttagtgacctcgatgaactcaaactttgtgagccagattct
gtaaataaagatctccatccttcagcttgtatagaaaatgaaggaaatggtttgtgtaat
gttcataacgagtcctatttaaatcctgataattttgttcaggagaatccgtcaaatgat
ctagaagactctgtaggaaagtcaaggactatatctaatcctattagtatttccagaaat
catagagtagctggtgagaataatgggttgcaggtggaatcacttcctaatatgtggtct
cttgatgccaagtttgacgcaaataaccatcgtcctgtaagccattctatggactcaagt
tctggaaccatgaagtggacatcaagcacgaaagatgatatgagctgtaaaaggttggat
gcagatcaggaacaaccattagaacatgaaaggtctagtagtgatgagagcgagacttca
gggaaactgaaaaatactctttataatcctgctgttgagatatctctttgcaaacactta
ctatatgaagggatgggggctgaagctgcatgtgaagtgtttgatgctgaaaaactggat
agcaaaaaaattagctctttaggtgctgctgttgtgaagaatgataaacttgttgttcga
attgggggtcattactttccatgggatgaagcagcacctattattttagggatggttgcg
tttggaagtgaaaaaatatttgaaccaaaaggcatgataccagttgacagagtggagaaa
tccattgaaggggatccatcaaaagatgtttcccgtagtggtagctggaggctttggcct
ttttctttgaaaagatcaagatctaggaaggctgtgcaactggctccagccgataccaga
gatttggatgctgagattgctgcagaggttactgctgctattgacgatgataaaaatttg
cttaaatccaagcagatgaagaaaatgatcagggcaatcactccaacctctgaacagttg
gcttcgttgaatctaaaggatgggatgaatcatataaccttcacgttttcaaccccaatg
ctagggaagcagcaggttgatgccagaatctatttgtggaaatggaacactcgtgtagta
atctcagacgttgacgggacaattacaaaatcagatgttcttggccagttcatgcctttg
gtcgggatagattggtcacaaacaggtgttgcgcatttattttcagctattaaggaaaat
ggttatcagttgctttttcttagtgcacgtgcaatagcccaggcatatatcaccagacaa
tttttagtcaaccttaagcaggatggtaaggcattaccagatgggccaattgttatatcc
cctgatggactttttccatccctatatcgagaagttattagaagagctcctcatgagttc
aagattgcttgcttagaggagattaaggcattgtttccatctgattgcaatccattctat
gctggtttcgggaatagagacaccgatgaaatcagctacgttaaggttggaatcccgata
ggaaaaatcttcattattaacccaaagggtgaggttgccgtgaaccgtcgtgttgacaca
aaatcttatacatctcttcacgctcttgttcatggcatgttcccaccgactacctcctcc
gagcaggaagatttcaattcgtggaatttctggaaactgccacctcctgtattcgacata
tga
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