Gossypium hirsutum (upland cotton): 107953314
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Entry
107953314 CDS
T04793
Name
(RefSeq) solanesyl-diphosphate synthase 1, mitochondrial isoform X1
KO
K14066
geranyl diphosphate synthase [EC:
2.5.1.1
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00900
Terpenoid backbone biosynthesis
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Module
ghi_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
107953314
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ghi01006
]
107953314
Enzymes [BR:
ghi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
107953314
Prenyltransferases [BR:
ghi01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
107953314
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
HrpJ
Motif
Other DBs
NCBI-GeneID:
107953314
NCBI-ProteinID:
XP_016744062
UniProt:
A0A1U8NYM7
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Position
A07:19394035..19401331
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AA seq
420 aa
AA seq
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MARAALLHLLRYRTASAAAAAEPLSAFRCQLMTRSNSKTPAAGIKWAGFCRPFSSKAALN
DVIGNDTDSSVAVMEPQEQVDPFSLVANELSLIATRLRSMVAAEVPNLASAAEYFFKIGA
EGKRFRPTVLLLMATALDVHIPELSPPGFGDTLTIDLRTRQQRIAEITEMIHVASLLHDD
VLDDADTRRGVGSLNAVMGNKLAVLAGDFLLSRACLTLASLKNTEVVTLIATVVENLVTG
ETMQLTTASNKRFSMEYYMQKTYNKTASLMSNSCKSVALLAGHTAEIAMLAFEYGKNLGL
AFQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEYPQLRAVVDKGFDNPANVD
IALEYLGKSRGIERTKELAMKHANLAAAAIDSLRQSDDEDVIKSRQALIDLTQRVITRNK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcgagggctgctcttcttcatttgttaagataccgcacggcttccgccgccgcagct
gcagaacctctctccgcctttagatgccaactgatgactagaagcaatagtaagacacca
gcagcagggattaagtgggcaggtttttgcagacctttcagctcaaaagctgctctaaat
gatgttatcggtaatgatacggattccagcgtggcggtcatggaaccacaggaacaagtt
gacccattttcccttgttgccaatgagctatcacttattgccaccagactgcggtcaatg
gtagctgctgaagttcctaatcttgcttcagctgcggagtacttcttcaaaattggggct
gaaggaaagaggtttcgtcccacggttttacttttaatggcgacagctttggatgtgcat
atacctgaactatctcctcctggatttggagataccttaacaattgatttgcgtacaaga
cagcagcgtatagctgagatcacagagatgatccatgtggcaagcctccttcatgacgat
gtcttggatgatgcagacacaagacgtggtgttggttcactaaatgctgtaatgggcaac
aagttggctgttttagcaggagatttcctgctttctcgagcttgtctgacccttgcttct
ttaaaaaatacagaggttgtcaccttaattgcaacagttgttgagaatcttgttactggt
gaaaccatgcaactaacaactgcttctaataaacgttttagcatggaatattacatgcag
aagacatacaacaagactgcatccttaatgtcaaacagctgcaagtcagttgcccttctt
gctgggcacacagcagaaatcgcaatgttagcctttgagtacggaaaaaatctgggatta
gcatttcaattgatagatgatgttcttgatttcacaggcacatcagcatcccttggaaag
ggttctttatctgatatccgacatggaatcataacagctccaatcttgtttgctatggaa
gaatatcctcaactgcgagcagtcgttgacaagggatttgacaaccccgcaaatgttgac
atagcactcgagtatcttgggaagagtaggggaatagaaaggaccaaggaactagccatg
aaacatgcaaatctagctgctgcagccattgattcactacgccaaagtgatgatgaagat
gtaataaagtcgaggcaggcccttattgatctcacccaaagagttatcaccagaaataag
tga
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