Gossypium hirsutum (upland cotton): 107954308
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Entry
107954308 CDS
T04793
Name
(RefSeq) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00240
Pyrimidine metabolism
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
107954308
Enzymes [BR:
ghi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
107954308
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GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-GeneID:
107954308
NCBI-ProteinID:
XP_016745314
UniProt:
A0A1U8P4R8
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Position
D07:18975768..18980096
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AA seq
332 aa
AA seq
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MASSSPSSSSAVKRLSNLSNHLSPTNSNPLVKVSAQVSQALSTGLPVVALESTIISHGMP
YPQNLETAKEVEAIVRDNGAIPATIAILDGVPCIGLNLEQLERLARMGKSAQKTARRDIA
YVVATKRNGATTVSATMFFAAMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAV
VSAGVKSILDIPRTLEYLETQGVCVAAYKTNEFPAFFTETSGCKVPCRLGSPEECAQLID
ANRKLNLGNGVLIAVPIAKEYSASGSLIESAIQQALTEAREKNITGNAETPFLLARVNEI
TGGASLASNIALVKNNAAIGAKISVALAQLLK
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcttctccatcatcatcatcggctgttaaaagactatcaaatctcagcaac
catctttccccaactaactcaaaccctttagtcaaagtatctgctcaagtgtcccaggct
ctctccactggtctcccggttgttgctctcgagtccaccatcatttcccatggaatgccg
tatccgcagaatttggaaacagccaaggaggtggaggcgattgtgagggacaatggagct
attcctgctaccatcgccattcttgatggcgtaccatgcataggtttgaatttggaacaa
ctggaaaggcttgcccgaatgggaaaaagtgctcaaaagacagctcgaagggacattgca
tatgttgtggccaccaagaggaatggtgcaacaactgtttctgcaactatgtttttcgct
gccatggttggtatacctgtttttgttactgggggaattgggggagtgcataggcatggc
gagcatacaatggatatatcctctgacctcacggagcttggaaggacaccagtagcagtc
gtttctgctggtgtaaaatctatattagatattccgaggacactggaatatttggaaact
cagggagtttgtgttgctgcttacaagaccaatgagtttccagctttttttactgaaaca
agtggctgcaaggtgccttgtcggttaggtagcccagaagaatgtgcacagttaattgat
gcaaacaggaagcttaatctcggaaatggagtactgattgcggttcccatcgcaaaagaa
tactcagcttctggaagcttaatagagtctgcaatacaacaagctcttacagaagccagg
gaaaagaacataacagggaatgctgagactccattcttgctcgctagggttaatgaaata
actggaggagcatcacttgcttcaaacattgcgcttgtgaaaaacaatgctgctatcggt
gctaagatatctgtagccctggcccagctcctcaaataa
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