Gossypium hirsutum (upland cotton): 107954362
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Entry
107954362 CDS
T04793
Name
(RefSeq) ribosomal RNA small subunit methyltransferase
KO
K14191
18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:
2.1.1.183
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107954362
Enzymes [BR:
ghi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.183 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase
107954362
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
107954362
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RrnaAD
Methyltransf_25
Methyltransf_12
Methyltransf_11
Methyltransf_31
PCMT
Methyltransf_23
PPS_PS
Methyltransf_2
Ermin
DREV
CMAS
UPF0020
Methyltransf_28
Motif
Other DBs
NCBI-GeneID:
107954362
NCBI-ProteinID:
XP_016745387
UniProt:
A0A1U8P2G1
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Position
D07:complement(20688116..20690295)
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AA seq
349 aa
AA seq
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MAGGKMKKDKQKGPRAPSNHYQGGVTFHKSKGQHILKNPLLVDAIVQKAGIKPTDTILEI
GPGTGNLTKKLLEAGKMVIAVELDPRMVLELQRRFQGTRFSSRLKVIQGDVLKTDLPYFD
ICVANIPYQISSPLTFKLLFHQPAFRCSIIMFQREFAMRLVAQPGDNLYCRLSVNTQFYA
RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPEVNHKEWDGFIRICFIRKNKTLGSIFK
QKNVLSLLEKNYKTLQALQGSQNVSLSGNDDMEIARLGNESMEMDDGMDDDMDMECDEAE
GEGEVSEFKNKVISVLKEGKFEEQRASKLSQESFLTLLSMFNKAGIHFS
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagggaagatgaagaaagataagcaaaaagggccgagagccccctccaatcac
taccaaggtggtgtcactttccacaaatccaaaggccagcacatccttaagaaccctttg
ttggtcgacgctattgtccaaaaggccggcatcaaacccaccgataccatcctcgaaatc
ggtcccggtactggtaaccttaccaagaagcttcttgaagccggcaaaatggtcatcgcc
gtcgaactcgatcctcgtatggtcctcgaacttcaacgccgctttcaaggcacccgtttc
tctagtcgcttaaaggttattcaaggtgatgttctgaagacggatttgccctattttgat
atatgtgtggcgaatattccgtatcaaatatcttctcctcttacattcaagttactgttt
catcagcctgctttcaggtgttctattattatgttccagagagaattcgcaatgcgactc
gttgctcagcctggtgataatctttactgccggctttccgtcaatacccaattttatgct
cgggtttcccatctcctcaaagttgggaagaacaatttccggcctccacctaaggttgat
tcttctgtcgtaaggatcgagccgaggaaaccacgccctgaagtgaatcataaggagtgg
gatgggtttataaggatttgtttcataaggaagaataagacactgggttccattttcaag
cagaaaaacgtactgtcactcttggagaagaactataagaccttgcaggcgctgcaaggc
tcacaaaatgtttctttgagtgggaatgatgatatggagattgcaagattaggcaatgag
agtatggaaatggatgatggaatggatgatgacatggatatggaatgtgatgaagcagaa
ggagaaggagaagtgtctgagtttaaaaataaggttataagtgtgttgaaggaaggaaaa
tttgaggagcagagagcatccaagcttagtcaggaaagctttttaaccttactctctatg
ttcaacaaggctggcatacacttctcttga
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