Gossypium hirsutum (upland cotton): 107954454
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Entry
107954454 CDS
T04793
Name
(RefSeq) lycopene beta cyclase, chloroplastic/chromoplastic
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00906
Carotenoid biosynthesis
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Module
ghi_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
107954454
Enzymes [BR:
ghi01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
107954454
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Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
Thi4
FAD_oxidored
HI0933_like
NAD_binding_8
Pyr_redox_3
Pyr_redox
FAD_binding_3
FAD_binding_2
Trp_halogenase
GIDA
3HCDH_N
Motif
Other DBs
NCBI-GeneID:
107954454
NCBI-ProteinID:
XP_016745502
UniProt:
A0A1U8P2R5
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Position
A13:complement(280195..282236)
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AA seq
497 aa
AA seq
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MDTLLRTHSKLEFSVLLHGFSEKACKTHQEVKFVPKKRRVPNGCVKVKASSSALLELVPE
TKKENLEYELPMFDPSKGAVVDLAVVGGGPAGLAVAQQVSQAGLSVCSIDPSPKLIWPNN
YGVWVDEFEAMDLLDCLDTTWSGAVVYIDDGKKKDLDRPYGRVNRKQLKSKMLLKCISNG
VKFHQAKVIKVIHEESKSLLICNDGVTVQATVVLDATGFSRCLVQYDKPYNPGYQMAYGI
LAEVEEHPFDVEKMVFMDWRDSHLSDSKELKERNSRIPTFLYAMPFSSNRIFLEETSLVA
RPGLPMDDIKERMVARLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHP
STGYMVARTLAAAPIVADAIVRCLDPGKNLMGDKLSTEVWRDLWPIQRRRQREFFCFGMD
ILLKLDLPATRRFFDAFFDLEPHYWHGFLSSRLFLPELITFGLSLFYHASNTSRLEIMGK
GTVPLVNMINNLVKDRE
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggatactttacttagaacacatagcaagcttgaattttcagttttactccacgggttt
tcagaaaaagcttgtaaaacccaccaagaagttaagtttgttcctaagaaaagaagagtc
cctaatggttgtgttaaggttaaggcaagtagtagtgctcttttagagttagtccctgaa
actaaaaaggaaaatttagaatatgaacttcctatgtttgatccatcaaaaggtgctgtt
gtggatttagctgttgttggtggtggtcctgctggtttagctgttgctcaacaagtttca
caagcaggactttcagtttgttcaattgatccatcaccaaaattgatttggcctaataat
tatggtgtttgggttgatgaatttgaagctatggatttgcttgattgtcttgatacaacc
tggtctggtgctgttgtgtatattgatgatggaaaaaagaaagatcttgatagaccttat
ggaagggttaataggaaacagcttaagtcgaaaatgctgttaaagtgtatatctaatggt
gtgaaattccatcaagcaaaggttattaaggttattcatgaggaatcaaagtctttattg
atttgtaatgacggtgttacggttcaagctactgttgttcttgatgctactggattctcg
aggtgtcttgttcaatatgataagccatataatccggggtatcaaatggcttatggaatt
ctagctgaggttgaagaacatccttttgatgttgaaaagatggtttttatggattggaga
gattcgcatctttccgatagtaaggagttgaaggagagaaatagtagaattcccacgttt
ctttatgcgatgcccttctcgtcaaaccgaatatttctcgaggaaacttctctagttgct
cgaccaggcttgcctatggatgatatcaaggaaagaatggtagctaggttaaagcaccta
ggaataaaagttaagagcatcgaagaggatgagcattgcgtcattccaatgggcggtccc
cttccggttttaccccaaagagttgtgggaattggcggaacagcgggaatggtgcacccg
tcgacgggttacatggttgcaagaacactagcagctgctccaatcgttgcggatgctatc
gtccggtgccttgatccgggaaagaacttgatgggagacaaattgtctactgaagtatgg
agagatttatggccaatacaaagaaggagacaaagggaattcttctgtttcgggatggat
attctacttaagctcgatttaccagcaacgagaaggttttttgatgcgtttttcgatttg
gaacctcattattggcatggattcttgtcatctagattgtttctcccagaactcataact
tttgggctatcactgttctatcatgcctctaatacctctaggttagagattatgggtaag
ggaactgttcctttggtcaacatgatcaataatttagtgaaggatagagagtaa
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