Gossypium hirsutum (upland cotton): 107957430
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Entry
107957430 CDS
T04793
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00900
Terpenoid backbone biosynthesis
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Module
ghi_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
107957430
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ghi01006
]
107957430
Enzymes [BR:
ghi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
107957430
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
107957430
2.5.1.29 geranylgeranyl diphosphate synthase
107957430
Prenyltransferases [BR:
ghi01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
107957430
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
107957430
NCBI-ProteinID:
XP_016748437
UniProt:
A0A1U8PB73
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All DBs
Position
D11:23049844..23051499
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AA seq
371 aa
AA seq
DB search
MASLNLGYWVQSYSMSNQVSSISKSFPLPRSLPFNPLTTQSSSTLKKVNFSSLPSITSIL
TKEDIVKEEEQYPQKSSFDFNSYMLQKASSVNQALESAVSLRDPVKIHEAMRYSLLAGGK
RVRPVLCLAACALVGGRESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVF
GEDIAVLAGDALLAFAFEHIAVSTVGVPPSRIVRAIGELAKAIGGEGLVAGQVVDIISEG
LTDVGLDHLEFIHVHKTAALLEAAVVLGAIVGGGCDEEVEKLRKFARCIGLLFQVVDDIL
DVTKSSKELGKTAGKDLVADKVTYPKLMGIQKSKEFAEKLKTDAIELLQGFDPAKAAPLI
ALANYIAYRQN
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggcttcattgaatctgggttattgggttcagtcttactccatgtctaaccaagtttct
tccatatccaaatcctttcctttacctagatctcttcccttcaatcctctcacaactcaa
tcatcttctaccctgaaaaaagtgaacttctcttctcttccttccattacctcaatcctt
accaaagaagacattgtcaaggaagaagaacaataccctcaaaagtcaagctttgatttc
aattcctacatgcttcaaaaagcaagttcagttaaccaagccttggaatctgctgtttca
ctccgtgaccctgttaaaatccatgaagcaatgcggtactcccttttagcaggtggaaaa
agggtacgtccggtgctttgtttagcagcctgtgcacttgttggtggccgggaatccatg
gctatgcccgcagcttgtgctgttgaaatgatccacaccatgtctttaatccacgatgat
ttgccttgcatggacaacgatgatcttcgtagaggaaaaccaaccaaccacaaagttttt
ggtgaggatatagctgtgttagcaggggatgctcttttagcttttgcttttgaacatata
gctgtttctacagttggtgttccgccttccaggattgtaagagctattggggaattagcc
aaagctattggaggggaggggttggtggctggtcaagtcgtggacataattagtgagggg
ctaacagatgtgggattggatcatttagaattcattcatgttcacaaaactgctgctttg
ctcgaagcggctgtggttttgggcgccattgttggaggtggatgtgatgaggaggtggaa
aagttaaggaaatttgcaaggtgcattgggcttttgtttcaggttgtggatgacattctt
gatgtaaccaagtcgtctaaggaattagggaagactgcagggaaagatttggtggctgat
aaagtgacttatccaaagttgatggggatacagaaatcaaaggagtttgctgagaagttg
aagactgatgcgatagagttgcttcaaggatttgaccctgccaaagctgctcctttgatt
gctttggctaattatatagcttacaggcaaaactaa
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