Gossypium hirsutum (upland cotton): 107958388
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Entry
107958388 CDS
T04793
Name
(RefSeq) beta-galactosidase 17-like
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00052
Galactose metabolism
ghi00511
Other glycan degradation
ghi00531
Glycosaminoglycan degradation
ghi00600
Sphingolipid metabolism
ghi00604
Glycosphingolipid biosynthesis - ganglio series
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
107958388
09103 Lipid metabolism
00600 Sphingolipid metabolism
107958388
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
107958388
00604 Glycosphingolipid biosynthesis - ganglio series
107958388
00511 Other glycan degradation
107958388
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107958388
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
107958388
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107958388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
107958388
NCBI-ProteinID:
XP_040969441
LinkDB
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Position
A05:13256101..13264647
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AA seq
738 aa
AA seq
DB search
MNRSKSLAATSKSITAMARKRSSKTTLIFFLLLSLLAFLSFLPVFASLPSLPSYSHSHDL
HFHLPRHQRLHRRQKISVRKFEIAEDKFWKDGKPFQIIGGDLHYFRVLPEYWEDRLLRAK
ALGLNTVQTYIPWNLHEPEAGKLVFEGIADLVSFLKLCQKLGLLVMLRAGPYICAEWDLG
GFPAWLLSIHPDVRLRSSDPAYLQKVEGWWGVLLPKVAPLLYGNGGPIIMVQIENEFGSC
GNDKAYLSHLVKLARGHLGEDIILYTTDGGSRETLEKGTIQGDGVFAAVDFTTGDNPWPI
FKLQKQFNSPGKSPPLSSEFYTGWLTHWSEKMARTDADFTAAALEKIMLQNGSVVLYMAH
GGTNFGFYNGANTGADESDYKPDLTSYDYDAPITESGDVDNAKFKAIRRVMGKFSSVSLP
SVPPNNKKTGYGSIQLKRTAFLFDLLDEIDPLHIVEAESPTAMEYLNQMFGFVLYVSEYV
AKTGGSKLVIPKVHDRAQVFISCSPEVNGGQVSYVGTLERWSNQAINLPNVKCVSSTSLF
ILVENMGRVNYGPYIFDRKGILSSVYVDGSVLKRWKMISIPFHNLNEVPKFNPVIQVASK
FHKVSAGKKLEHKSVGVGGPSFYTGHFSIDTKTEVTDTYISLRGWGKGIAFVNEFNIGRY
WPTSGPQCNLYIPAPILRQGENVLVIFELESPNPELMVDSVDQPDFTCGPGQASVHQNED
GKASASLLTPNPLGLRTF
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgaagtaaaagcctagctgcgacctccaaatcaattacagcaatggcgaggaag
cgaagcagcaaaactacgttgatcttcttccttttgctttcccttttagctttcctttct
ttccttcccgtcttcgcttctctcccttctcttccctcttactctcactctcacgatctt
cactttcatcttcctcgtcatcagcgtctgcatcgccgccaaaagattagtgttagaaaa
tttgaaattgcggaggataagttttggaaagatgggaagccttttcagataattggtggt
gacttgcattatttccgggttcttcctgagtactgggaagataggcttttgagggcaaaa
gcattggggttgaataccgttcaaacatatattccttggaatttgcatgaaccagaggct
ggcaaacttgtttttgaaggcattgcagatttggtatcatttctcaaactttgccagaaa
ctaggtctccttgttatgcttcgagctgggccttatatatgtgcagagtgggatcttgga
ggcttcccagcttggttactttccatacatccagatgttagattaaggtcatcagatcct
gcttaccttcaaaaggttgaaggatggtggggagtccttcttccaaaagtagctcctctt
ctttatggaaatggaggccctatcataatggttcagattgaaaatgaatttgggtcatgt
ggaaatgataaagcttatcttagtcacttggtgaagttagctagaggacatcttggagaa
gacattatattgtacactactgatggaggctctcgagaaactcttgaaaaagggaccatt
cagggagatggtgtctttgcagctgttgacttcactactggtgataacccttggcccata
ttcaagttacaaaagcagttcaattcccctgggaaatcaccaccgctttcttcggaattt
tacacaggttggcttacacactggagtgagaagatggcaaggacagatgcagattttact
gcggctgccttggaaaaaattatgttacaaaatggttctgttgtgctttatatggcacat
ggtggaacgaactttggattttataatggagcaaatactggtgcagatgagtcagattac
aagcctgatctaacatcctatgattacgacgcaccaattacagagtctggtgatgtagac
aatgcaaaattcaaagccattaggagagtgatggggaaatttagttcagtatctctacct
tcagttcctcccaataataaaaagactggatatggatccatccagttaaaaagaacagca
tttttatttgatttacttgatgagattgatcctcttcacattgttgaggcagaatctcca
actgcaatggagtatttaaaccagatgtttggatttgtattatatgtatctgaatatgta
gccaaaactggtggaagtaagctagttataccaaaggtgcatgacagagctcaagtgttc
atatcgtgctctcctgaagttaatggtgggcaagtatcatatgttggtacacttgaaaga
tggtcaaatcaagcaattaaccttcctaatgttaaatgtgtttctagcaccagcttattt
attttggttgaaaacatgggtcgtgtaaattatgggccatacatctttgataggaagggt
attttgtcttctgtttatgtggacgggagtgtactgaaaagatggaaaatgatctcaatt
ccttttcataacctgaatgaggtgccaaaatttaatcccgtcattcaggttgcatccaaa
ttccataaagtatcagccggcaaaaaactagaacacaagtcagttggtgttggaggacca
tcattctacactggccatttctctattgatacgaagactgaagttactgatacatacatt
tcacttagaggctggggaaaagggattgcttttgttaatgaattcaacattggaagatat
tggccgacttcaggacctcaatgcaacctttatatccctgctccaatccttcggcagggg
gaaaatgttttggtgatattcgagttagaatcaccgaaccctgagctcatggtagattcg
gttgatcagccagatttcacttgtggtccaggacaagcaagtgtgcatcaaaatgaagat
ggcaaagctagtgcgtcactgttaacacccaatccactagggctgcgtactttttga
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